DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0000639
Gene2410004B18Rik
Synonyms
Desc.RIKEN cDNA 2410004B18 gene
LocusNM_025555 chr3:145600996-145607239(+)
DB links


Entrez 66421
MGI 1913671
Ensembl ENSMUSG00000036873
Vega OTTMUSG00000022483
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000577
(v2.0)
2410004B18RikNM_02555566421
10.3316.00122.268651.652440.035518.43258.3707823.858331.759721.0189
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0000639
(v1.0)
2410004B18Rik66421
2-Cell Transient0.95701
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000577
(v2.0)
2410004B18Rik66421
687/3980.2741462/3980.0987157/3982.2249446/3981.489715/398-2.5939111/398-2.4256
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000577
(v2.0)
2410004B18Rik66421
382/1640.7037223/1640.3254150/1643.3789391/1642.56657/164-2.335966/164-1.8885
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000577
(v2.0)
2410004B18Rik66421
96.036319250.02
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000577
(v2.0)
2410004B18Rik66421
25.848411921.72
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000639
(v1.0)
2410004B18RikNM_02555566421
16.62315.403438.489627.79315.8546
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000639
(v1.0)
2410004B18RikFR011557,NM_02555566421
82.144569.8746145.065102.62925.672
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0000639
(v1.0)
2410004B18RikNM_02555566421
17.38093.777816.8055
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0000639
(v1.0)
2410004B18RikNM_02555566421
16.965415.248817.6745
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0000639
(v1.0)
2410004B18RikFR011557,NM_02555566421
59.785857.7273
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0000639
(v1.0)
2410004B18RikNM_02555566421
17.3913.7260619.3848
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0000639
(v1.0)
2410004B18RikNM_02555566421
35.635426.835422.013
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0000639
(v1.0)
2410004B18RikFR011557,NM_02555566421
66.373166.3643
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0000639
(v1.0)
2410004B18RikNM_02555566421
8.7325572.3402
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0000639
(v1.0)
2410004B18RikNM_02555566421
40.247925.3117
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0000639
(v1.0)
1419174_atMm.251372410004B18RikNM_025555.466421
640.65539.7751790.9251114.15636.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0000639
(v1.0)
A_51_P3255922410004B18RikNM_02555566421
11P0.4760.0857P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0000639
(v1.0)
2410004B18Rik66421
001001