DBTMEE:0000717
| Gene | 2700049A03Rik |
| Synonyms | talpid3 |
| Description | RIKEN cDNA 2700049A03 gene |
| Locus | NM_029818 UCSC: chr12:72237835-72344290(+) OLP: chr12:72237835-72344290(+)
NM_001163378 UCSC: chr12:72237835-72344290(+) OLP: chr12:72237835-72344290(+)
|
| DB links |
Entrez 76967
MGI 1924217
Ensembl ENSMUSG00000034601
Vega OTTMUSG00000033139
|
| Feature | protein-coding |
| GO_BP |
-
 1 Terms
|
| GO_MF | |
| GO_CC |
-
3 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2000641 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0000717
(v1.0) | 2700049A03Rik | NM_001163378,NM_029818 | 76967
| 96.1875 | 80.3181 | 15.1081 | 6.15924 | 2.5586 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0000717
(v1.0) | 2700049A03Rik | NM_001163378,NM_029818 | 76967
| 100.573 | 0.95736 | 87.6287 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0000717
(v1.0) | 2700049A03Rik | NM_001163378,NM_029818 | 76967
| 98.169 | 79.5116 | 67.6821 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0000717
(v1.0) | 2700049A03Rik | NM_001163378,NM_029818 | 76967
| 100.631 | 0.944249 | 74.2315 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0000717
(v1.0) | 2700049A03Rik | NM_001163378,NM_029818 | 76967
| 13.9877 | 5.94699 | 6.50074 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0000717
(v1.0) | 2700049A03Rik | NM_001163378,NM_029818 | 76967
| 67.3804 | 6.15208 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0000717
(v1.0) | 2700049A03Rik | NM_001163378,NM_029818 | 76967
| 29.4299 | 29.0974 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0000717
(v1.0) | 1273 | C0192C01-3 | Mm.87290 | 2700049A03Rik | 76967
| U014051 | NAP002620-001 | | TC915312 | Q9CZN0 | U,F,2 | 3.6132 | 3.7176 | 2.7423 | 2.5869 | 2.3502 | 2.6632 | 2.6964 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0000717
(v1.0) | 1429595_at | Mm.87290 | 2700049A03Rik | NM_001163378.1,NM_029818.1 | 76967
| 3002.1 | 2362.48 | 930.4 | 0 | 0 |
0000717
(v1.0) | 1437248_at | Mm.87290 | 2700049A03Rik | NM_001163378.1,NM_029818.1 | 76967
| 1442.68 | 2241.32 | 485.35 | 0 | 0 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0000717
(v1.0) | A_51_P118535 | 2700049A03Rik | AK012399 | 76967
| 1 | 1 | P | 1.661 | 0.124 | P |
0000717
(v1.0) | A_51_P118539 | 2700049A03Rik | AK012399 | 76967
| 1 | 1 | P | 1.248 | 0.269 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0000717
(v1.0) | 2700049A03Rik | 76967
| 0 | 1 | 0 | 0 | 1 | 0 |
|
