DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0000795
Gene3110009E18Rik
Synonyms
Desc.RIKEN cDNA 3110009E18 gene
LocusNM_028439 chr1:122017764-122084766(+)
NM_001172074 chr1:122017764-122084766(+)
DB links


Entrez 73103
MGI 1920353
Ensembl ENSMUSG00000026388
Vega OTTMUSG00000030546
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000708
(v2.0)
3110009E18RikNM_001172074,NM_02843973103
2.2814436.38348.24495.237717.69730.1984944.5401934.68814.592110.223313
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0000795
(v1.0)
3110009E18Rik73103
Maternal RNA0.93391
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000708
(v2.0)
3110009E18Rik73103
675/511-0.111429/511-0.3677157/5111.8738449/5111.140827/511-2.1437213/511-1.8544
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000708
(v2.0)
3110009E18Rik73103
286/228-0.185192/228-0.3623141/2282.8431359/2281.97446/228-2.993951/228-2.7239
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000708
(v2.0)
3110009E18Rik73103
92.99417852.24
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000708
(v2.0)
3110009E18Rik73103
30.719511227.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000795
(v1.0)
3110009E18RikNM_001172074,NM_02843973103
37.810233.34013.888125.323253.2479
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000795
(v1.0)
3110009E18RikNM_001172074,NM_02843973103
56.691742.97044.61326.493244.35528
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0000795
(v1.0)
3110009E18RikNM_001172074,NM_02843973103
39.53410.83372736.3748
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0000795
(v1.0)
3110009E18RikNM_001172074,NM_02843973103
38.589233.005425.639
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0000795
(v1.0)
3110009E18RikNM_001172074,NM_02843973103
43.637537.0696
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0000795
(v1.0)
3110009E18RikNM_001172074,NM_02843973103
39.5570.82230828.12
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0000795
(v1.0)
3110009E18RikNM_001172074,NM_02843973103
3.59985.139813.13326
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0000795
(v1.0)
3110009E18RikNM_001172074,NM_02843973103
6.423255.22585
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0000795
(v1.0)
3110009E18RikNM_001172074,NM_02843973103
20.77960.639784
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0000795
(v1.0)
3110009E18RikNM_001172074,NM_02843973103
66.3253110.578
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0000795
(v1.0)
1428023_atMm.2716023110009E18RikNM_001172074.1,NM_028439.273103
338.45428.899.15064.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0000795
(v1.0)
A_52_P2191413110009E18RikNM_02843973103
11P0.9920.951P
Proteome N/A