DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001994
GeneAcbd3
SynonymsD1Ertd10e
Gocap1
Pap7
Desc.acyl-Coenzyme A binding domain containing 3
LocusNM_133225 chr1:182656174-182684335(+)
DB links


Entrez 170760
MGI 2181074
Ensembl ENSMUSG00000026499
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001875
(v2.0)
Acbd3NM_133225170760
16.9058159.502205.72230.999826.49649.7330517.4549182.49925.59789.04006
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001994
(v1.0)
Acbd3170760
Maternal RNA0.97159
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001875
(v2.0)
Acbd3170760
783/4360.3312519/4360.1349182/4362.309620/4361.833220/436-2.3318187/436-1.8123
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001875
(v2.0)
Acbd3170760
449/1940.695295/1940.4863167/1943.3059471/1942.595410/194-2.113385/194-1.7718
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001875
(v2.0)
Acbd3170760
51.940911744.39
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001875
(v2.0)
Acbd3170760
12.36657616.27
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001994
(v1.0)
Acbd3NM_133225170760
165.751142.14223.076518.365212.2368
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001994
(v1.0)
Acbd3FR011141,FR295846,NM_133225170760
213.268164.66627.31122.337314.8028
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001994
(v1.0)
Acbd3NM_133225170760
173.3086.18263155.08
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001994
(v1.0)
Acbd3NM_133225170760
169.165140.715135.135
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001994
(v1.0)
Acbd3FR011141,FR295846,NM_133225170760
167.224158.599
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001994
(v1.0)
Acbd3NM_133225170760
173.4086.09795148.211
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001994
(v1.0)
Acbd3NM_133225170760
21.365217.732417.7417
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001994
(v1.0)
Acbd3FR011141,FR295846,NM_133225170760
22.096121.9062
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001994
(v1.0)
Acbd3NM_133225170760
127.90915.2919
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001994
(v1.0)
Acbd3NM_133225170760
74.475279.5318
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001994
(v1.0)
8050H3059B05-3Mm.39477Gocap1170760
U001193NAP096801-001Gocap1TC914624,TC914623,TC914622O35371U,F4.40164.30894.1524.11164.26054.1454.2779
0001994
(v1.0)
8969H3074H02-3Mm.39477Gocap1170760
U001193NAP096801-001Gocap1TC914622O35371U,F4.58674.52373.72313.66153.3843.41873.4346
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001994
(v1.0)
1452137_atMm.272981Acbd3NM_133225.3170760
146.125291.37579.325043.375
0001994
(v1.0)
1456316_a_atMm.272981Acbd3NM_133225.3170760
270.875685.725000
0001994
(v1.0)
1428668_atMm.272981Acbd3NM_133225.3170760
5620.0756841.7251494.375937.151085.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0001994
(v1.0)
A_51_P326764Acbd3NM_133225170760
11P0.6170.13P
0001994
(v1.0)
A_52_P58006Acbd3NM_133225170760
11P0.6010.123P
0001994
(v1.0)
A_52_P72497Acbd3NM_133225170760
11P0.8460.342P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0001994
(v1.0)
Acbd3170760
5755129