DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002020
GeneAco1
SynonymsAco-1
Irebp
Irp1
Desc.aconitase 1
LocusNM_007386 chr4:40090298-40146042(+)
DB links


Entrez 11428
MGI 87879
Ensembl ENSMUSG00000028405
Vega OTTMUSG00000006559
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001900
(v2.0)
Aco1NM_00738611428
26.192134.296918.87035.054066.588729.4884317.383817.72488.064888.5294
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002020
(v1.0)
Aco111428
Maternal RNA0.95613
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001900
(v2.0)
Aco111428
661/494-0.0925451/494-0.247100/4941.2759232/4940.2398120/4940.0162695/494-0.1066
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001900
(v2.0)
Aco111428
344/2290.0739194/229-0.353796/2292.2873214/2291.224564/2290.215378/2290.1232
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001900
(v2.0)
Aco111428
55.538510652.39
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001900
(v2.0)
Aco111428
13.97646222.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002020
(v1.0)
Aco1NM_00738611428
35.649713.07173.769074.5679812.3533
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002020
(v1.0)
Aco1NM_00738611428
330.766129.07341.340838.9654141.894
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002020
(v1.0)
Aco1NM_00738611428
37.2759.5787214.2615
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002020
(v1.0)
Aco1NM_00738611428
36.384112.940513.1422
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002020
(v1.0)
Aco1NM_00738611428
163.023103.302
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002020
(v1.0)
Aco1NM_00738611428
37.29679.4475314.4139
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002020
(v1.0)
Aco1NM_00738611428
3.489574.410575.59812
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002020
(v1.0)
Aco1NM_00738611428
53.156761.2693
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002020
(v1.0)
Aco1NM_00738611428
12.0880.342713
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002020
(v1.0)
Aco1NM_00738611428
0.8901850.879253
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002020
(v1.0)
316C0100D02-3Mm.4927Aco111428
U042522NAP005881-001Aco1;TC857924,TC857922P282713.42123.34123.40783.34023.85453.60773.856
0002020
(v1.0)
4373C0931B05-3Mm.59934Aco111428
NAP037332-1TC9277842.77012.81772.58662.682.71812.63182.662
0002020
(v1.0)
20746L0809G01-3Mm.150128Aco111428
Aco1TC9222812.94732.8492.6022.71533.01552.90792.9136
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002020
(v1.0)
1423644_atMm.331547Aco1NM_007386.211428
227.35138.425100.850161.625
0002020
(v1.0)
1456728_x_atMm.331547Aco1NM_007386.211428
988.5424.9488.775128.75623.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002020
(v1.0)
A_51_P391082Aco1NM_00738611428
11P0.6060.13P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002020
(v1.0)
Aco111428
202715415128