DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002075
GeneActl6a
SynonymsActl6
ARP4
Baf53a
Desc.actin-like 6A
LocusNM_019673 chr3:32607468-32625893(+)
DB links


Entrez 56456
MGI 1861453
Ensembl ENSMUSG00000027671
Vega OTTMUSG00000021872
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001955
(v2.0)
Actl6aNM_01967356456
21.795122.876139.043917.71723.824862.582513.591939.557821.937380.9043
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002075
(v1.0)
Actl6a56456
1-Cell Transient0.9777
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001955
(v2.0)
Actl6a56456
596/3610.21410/3610.0672227/3612.8904456/3611.661529/361-1.5477183/361-1.5716
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001955
(v2.0)
Actl6a56456
328/1700.4331214/1700.2147215/1703.8471423/1702.62868/170-2.216655/170-2.1966
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001955
(v2.0)
Actl6a56456
61.328216038.33
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001955
(v2.0)
Actl6a56456
9.1734989.36
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002075
(v1.0)
Actl6aNM_01967356456
23.775827.048913.194716.52979.66366
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002075
(v1.0)
Actl6aFR062861,NM_01967356456
169.898236.008132.398123.54375.561
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002075
(v1.0)
Actl6aNM_01967356456
24.85987.9706729.511
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002075
(v1.0)
Actl6aNM_01967356456
24.265626.777329.3011
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002075
(v1.0)
Actl6aFR062861,NM_01967356456
270.547326.044
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002075
(v1.0)
Actl6aNM_01967356456
24.87437.861532.1364
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002075
(v1.0)
Actl6aNM_01967356456
12.216215.960115.195
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002075
(v1.0)
Actl6aFR062861,NM_01967356456
50.088681.5697
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002075
(v1.0)
Actl6aNM_01967356456
16.118313.2195
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002075
(v1.0)
Actl6aNM_01967356456
10.6688.34832
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002075
(v1.0)
9375H3080C12-3Mm.29546Baf53a-pending56456
U003130NAP095824-001Baf53a;TC903980,TC903979U,F,22.76153.18133.11933.3052.56513.05782.7104
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002075
(v1.0)
1416569_atMm.41077Actl6aNM_019673.256456
292239.925257.075343.625288.225
0002075
(v1.0)
1456730_x_atMm.41077Actl6aNM_019673.256456
542.1546.675654.95870.2595.45
0002075
(v1.0)
1429883_atMm.41077Actl6aNM_019673.256456
000636.1632.2
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002075
(v1.0)
Actl6a56456
131141