DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002088
GeneActr3
SynonymsArp3
Desc.ARP3 actin-related protein 3
LocusNM_001205385 chr1:127289482-127332304(-)
NM_023735 chr1:127289482-127332304(-)
NM_001205386 chr1:127289482-127332304(-)
DB links


Entrez 74117
MGI 1921367
Ensembl ENSMUSG00000026341
Featureprotein-coding
GO(BP)
  •   14 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001968
(v2.0)
Actr3NM_001205385,NM_001205386,NM_02373574117
140.44777.8885134.6679.935939.755876.253238.307696.636834.624477.2434
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002088
(v1.0)
Actr374117
Minor ZGA0.95364
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001968
(v2.0)
Actr374117
666/4370.0949477/4370.0101194/4372.3974685/4371.973622/437-2.2038255/437-1.3712
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001968
(v2.0)
Actr374117
341/1680.506214/1680.2317177/1683.5839503/1682.89484/168-3.047965/168-1.9446
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001968
(v2.0)
Actr374117
51.204512042.67
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001968
(v2.0)
Actr374117
11.6687914.77
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002088
(v1.0)
Actr3NM_02373574117
82.44594.760860.627528.046527.5854
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002088
(v1.0)
Actr3NM_02373574117
100.185109.72670.980931.448432.5688
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002088
(v1.0)
Actr3NM_02373574117
86.203852.3222103.386
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002088
(v1.0)
Actr3NM_02373574117
84.143593.809372.8106
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002088
(v1.0)
Actr3NM_02373574117
443.85467.098
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002088
(v1.0)
Actr3NM_02373574117
86.253951.605579.8562
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002088
(v1.0)
Actr3NM_02373574117
56.131627.0824.4198
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002088
(v1.0)
Actr3NM_02373574117
204.791215.76
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002088
(v1.0)
Actr3NM_02373574117
61.933447.6706
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002088
(v1.0)
Actr3NM_02373574117
38.599736.3416
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002088
(v1.0)
4013C0911B07-3Mm.183102Actr374117
3.06333.22253.78083.3122.9093.13963.1421
0002088
(v1.0)
6036H3015B09-3Mm.183102Actr374117
U021717NAP094486-001Actr3;TC885718,TC885716Q99JY9U,F,24.29924.34853.73033.91123.75734.03654.4282
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002088
(v1.0)
1426392_a_atMm.183102Actr3NM_023735.174117
1214.2751536.9751956.25559.3752340.975
0002088
(v1.0)
1434968_a_atMm.183102Actr3NM_023735.174117
1346.951144.6251699.85515.6752110.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002088
(v1.0)
A_51_P217535Actr3NM_02373574117
11P0.6480.144P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002088
(v1.0)
Actr374117
711318204