DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002252
GeneAfg3l2
SynonymsEmv66
par
Desc.AFG3(ATPase family gene 3)-like 2 (yeast)
LocusNM_027130 chr18:67564418-67608790(-)
DB links


Entrez 69597
MGI 1916847
Ensembl ENSMUSG00000024527
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002133
(v2.0)
Afg3l2NM_02713069597
28.32847.803646.419917.187615.412616.338729.03337.050216.23615.9371
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002252
(v1.0)
Afg3l269597
Maternal RNA0.99664
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002133
(v2.0)
Afg3l269597
671/3990.2366436/3990.0117288/3993.09251042/3992.708568/399-0.4889453/399-0.415
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002133
(v2.0)
Afg3l269597
388/2080.385228/2080.0162265/2083.8741792/2083.244723/208-1.0863154/208-1.0258
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002133
(v2.0)
Afg3l269597
79.14115351.73
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002133
(v2.0)
Afg3l269597
33.110710232.46
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002252
(v1.0)
Afg3l2NM_02713069597
49.679532.257712.804710.689820.6329
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002252
(v1.0)
Afg3l2NM_02713069597
306.728184.84793.899655.6695143.755
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002252
(v1.0)
Afg3l2NM_02713069597
51.944510.359835.1938
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002252
(v1.0)
Afg3l2NM_02713069597
50.70331.933827.5223
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002252
(v1.0)
Afg3l2NM_02713069597
477.604230.768
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002252
(v1.0)
Afg3l2NM_02713069597
51.974710.217930.1855
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002252
(v1.0)
Afg3l2NM_02713069597
11.855110.321411.2234
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002252
(v1.0)
Afg3l2NM_02713069597
107.553255.95
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002252
(v1.0)
Afg3l2NM_02713069597
68.93889.75301
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002252
(v1.0)
Afg3l2NM_02713069597
20.385810.9536
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002252
(v1.0)
17653L0004C12-3Mm.397512310036I02Rik69597
2310036I02RikTC8479423.23243.14512.85962.76952.65762.84192.755
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002252
(v1.0)
1427206_atMm.426052Afg3l2NM_027130.169597
186.65151.475123.750113.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002252
(v1.0)
A_51_P115027Afg3l2BC03699969597
11P0.9420.744P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002252
(v1.0)
Afg3l269597
1018722519