DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002256
GeneAftph
Synonyms
Desc.aftiphilin
LocusNM_001252503 chr11:20585088-20641551(-)
NM_181411 chr11:20585088-20641551(-)
DB links


Entrez 216549
MGI 1923012
Ensembl ENSMUSG00000049659
Vega OTTMUSG00000005232
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002137
(v2.0)
AftphNM_001252503,NM_001290545,NM_181411216549
18.842331.183766.85558.899743.079715.368529.24849.503443.307916.038
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002256
(v1.0)
Aftph216549
Minor ZGA0.93292
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002137
(v2.0)
Aftph216549
734/3660.49519/3660.3868207/3662.7388566/3661.952958/366-0.5916319/366-0.7947
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002137
(v2.0)
Aftph216549
381/1261.0775239/1260.8025193/1264.091535/1263.39167/126-1.966463/126-1.5765
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002137
(v2.0)
Aftph216549
23.807610323.11
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002137
(v2.0)
Aftph216549
3.0452813.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002256
(v1.0)
AftphNM_181411216549
32.176346.282443.477129.529420.5428
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002256
(v1.0)
AftphNM_181411216549
58.375668.095986.15875.892644.0031
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002256
(v1.0)
AftphNM_181411216549
33.64326.9750.4951
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002256
(v1.0)
AftphNM_181411216549
32.839145.817736.3899
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002256
(v1.0)
AftphNM_181411216549
52.415642.1176
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002256
(v1.0)
AftphNM_181411216549
33.66286.8745339.9112
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002256
(v1.0)
AftphNM_181411216549
40.25328.511829.6553
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002256
(v1.0)
AftphNM_181411216549
34.1882109.747
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002256
(v1.0)
AftphNM_181411216549
36.162636.4525
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002256
(v1.0)
AftphNM_181411216549
1.220232.34271
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002256
(v1.0)
1426861_atMm.356580AftphNM_181411.2216549
231.625386.275491.5750143.15
0002256
(v1.0)
1457300_atMm.356580AftphNM_181411.2216549
0088.3500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002256
(v1.0)
A_52_P1617629130023F12RikNM_181411216549
11P0.6450.146P
Proteome N/A