DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002453
GeneAlyref
SynonymsREF1
Refbp1
Thoc4
Desc.Aly/REF export factor
LocusNM_011568 chr11:120455830-120459679(-)
DB links


Entrez 21681
MGI 1341044
Ensembl ENSMUSG00000025134
Vega OTTMUSG00000004088
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002337
(v2.0)
AlyrefNM_01156821681
23.716225.834627.0788184.183194.589148.02686.711442.5923186.812171.793
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002453
(v1.0)
Thoc421681
Major ZGA0.99704
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002337
(v2.0)
Alyref21681
750/4580.1983503/4580.019183/4582.2477403/4581.142423/458-2.2095148/458-2.2176
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002337
(v2.0)
Alyref21681
440/1860.7263256/1860.343177/1863.4465369/1862.304113/186-1.70686/186-1.6948
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002453
(v1.0)
Thoc4NM_01156821681
26.851918.7903137.177135.25462.0104
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002453
(v1.0)
Thoc4NM_01156821681
129.27162.7356769.693611.371162.297
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002453
(v1.0)
Thoc4NM_01156821681
28.07618.6732620.5006
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002453
(v1.0)
Thoc4NM_01156821681
27.40518.601631.6387
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002453
(v1.0)
Thoc4NM_01156821681
106.288182.125
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002453
(v1.0)
Thoc4NM_01156821681
28.09248.5544734.7002
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002453
(v1.0)
Thoc4NM_01156821681
127.004130.593129.389
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002453
(v1.0)
Thoc4NM_01156821681
192.194204.937
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002453
(v1.0)
Thoc4NM_01156821681
11.976912.3837
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002453
(v1.0)
Thoc4NM_01156821681
0.3378850.987923
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002453
(v1.0)
18371L0204B11-3Mm.1886Refbp121681
U033723NAP006093-001Refbp1;TC870282O085832.7352.9743.08153.04592.88722.94992.8706
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002453
(v1.0)
1417724_atMm.1886Thoc4NM_011568.121681
76.0587.025719.25360.325304.6
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002453
(v1.0)
A_51_P154684Thoc4NM_01156821681
11P0.6550.148P
Proteome N/A