DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002459
GeneAmbra1
Synonyms
Desc.autophagy/beclin 1 regulator 1
LocusNM_172669 chr2:91570295-91759006(+)
NM_001080754 chr2:91570295-91759006(+)
DB links


Entrez 228361
MGI 2443564
Ensembl ENSMUSG00000040506
Vega OTTMUSG00000014330
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002342
(v2.0)
Ambra1NM_001080754,NM_172669228361
9.8341664.843284.887328.517927.98067.207586.9244187.637822.35676.59028
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002459
(v1.0)
Ambra1228361
Minor ZGA0.96897
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002342
(v2.0)
Ambra1228361
567/3070.3712383/3070.2023127/3072.283276/3071.1712100/3070.4345608/3070.3854
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002342
(v2.0)
Ambra1228361
291/1210.7484180/1210.4536123/1213.4985248/1212.342718/121-0.662126/121-0.5356
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002342
(v2.0)
Ambra1228361
44.241410641.74
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002342
(v2.0)
Ambra1228361
17.32737622.8
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002459
(v1.0)
Ambra1NM_001080754,NM_172669228361
67.422958.849421.206519.37854.80334
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002459
(v1.0)
Ambra1FR398165,NM_001080754,NM_172669228361
105.11887.901438.26540.16258.61626
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002459
(v1.0)
Ambra1NM_001080754,NM_172669228361
70.49693.5965964.206
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002459
(v1.0)
Ambra1NM_001080754,NM_172669228361
68.811958.258565.0378
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002459
(v1.0)
Ambra1FR398165,NM_001080754,NM_172669228361
153.564106.369
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002459
(v1.0)
Ambra1NM_001080754,NM_172669228361
70.53783.5473371.3313
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002459
(v1.0)
Ambra1NM_001080754,NM_172669228361
19.633918.710715.5663
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002459
(v1.0)
Ambra1FR398165,NM_001080754,NM_172669228361
41.369730.9227
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002459
(v1.0)
Ambra1NM_001080754,NM_172669228361
29.51987.26695
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002459
(v1.0)
Ambra1NM_001080754,NM_172669228361
2.174661.06596
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002459
(v1.0)
917C0160A03-3Mm.4631A130023A14228361
U002129NAP001416-001TC893614U,F,23.89153.9043.66023.59114.14773.77554.0752
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002459
(v1.0)
1454985_atMm.436667Ambra1NM_172669.3,NM_001080754.1228361
116.625256.8000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002459
(v1.0)
A_52_P679020D030051N19RikNM_172669228361
11P0.6050.125P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002459
(v1.0)
Ambra1228361
200300