DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002460
GeneAmd1
SynonymsAdoMetDC
Amd-1
SAMDC
Desc.S-adenosylmethionine decarboxylase 1
LocusNM_009665 chr10:40007264-40021994(-)
DB links


Entrez 11702
MGI 88004
Ensembl ENSMUSG00000075232
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
      Cysteine and methionine metabolism (mmu00270)
      Arginine and proline metabolism (mmu00330)
      Metabolic pathways (mmu01100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002343
(v2.0)
Amd1NM_00966511702
33.274956.596295.835282.714371.29881.035642.264355.2133285.20285.3727
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002460
(v1.0)
Amd111702
Major ZGA0.99368
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002343
(v2.0)
Amd111702
659/3730.3075406/3730.0061324/3733.3561750/3732.3312127/3730.4987576/3730.0275
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002343
(v2.0)
Amd111702
375/1360.9454208/1360.4937304/1364.643625/1363.507461/1360.881185/136-0.1542
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002343
(v2.0)
Amd111702
50.870820524.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002343
(v2.0)
Amd111702
14.18671618.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002460
(v1.0)
Amd1NM_00966511702
58.86666.1679210.694257.7529.9952
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002460
(v1.0)
Amd1FR247131,FR265089,NM_00966511702
549.476370.837353.7891993.940.822426
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002460
(v1.0)
Amd1NM_00966511702
61.549912.181172.1906
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002460
(v1.0)
Amd1NM_00966511702
60.078865.503540.9133
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002460
(v1.0)
Amd1FR247131,FR265089,NM_00966511702
53.8248193.993
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002460
(v1.0)
Amd1NM_00966511702
61.585612.014344.8724
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002460
(v1.0)
Amd1NM_00966511702
195.07248.868196.852
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002460
(v1.0)
Amd1FR247131,FR265089,NM_00966511702
1972.46994.581
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002460
(v1.0)
Amd1NM_00966511702
22.2802116.566
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002460
(v1.0)
Amd1NM_00966511702
38.801443.2276
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002460
(v1.0)
2698C0353G11-3Mm.7880Amd111702
U044014NAP112498-1TC9253963.78934.00853.72593.89373.66433.68263.6736
0002460
(v1.0)
19301L0265C01-3Mm.7880Amd111702
U031712NAP000258-001Amd1;TC925396P31154U,F,24.01354.10283.62244.10053.42813.41823.2421
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002460
(v1.0)
1448484_atMm.476925~Mm.253533Amd2~Amd1NM_007444.3~NM_009665.5100041585
11702
540.65928.151606.652092.45863.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002460
(v1.0)
A_51_P381763Amd1Z1498611702
11P0.8850.437P
Proteome N/A