DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002716
GeneApoo
Synonyms
Desc.apolipoprotein O
LocusNM_026673 chrX:91612449-91662431(+)
NM_001199337 chrX:91612493-91662431(+)
NM_001199338 chrX:91612493-91662431(+)
NM_001199339 chrX:91612493-91662431(+)
DB links


Entrez 68316
MGI 1915566
Ensembl ENSMUSG00000079508
Vega OTTMUSG00000018120
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002606
(v2.0)
ApooNM_001199337,NM_001199338,NM_001199339,NM_02667368316
7.4989856.407553.48699.189515.17855.952015.4732846.682521.61957.47962
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002716
(v1.0)
Apoo68316
Maternal RNA0.99283
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002606
(v2.0)
Apoo68316
334/1880.3148261/1880.3554295/1884.1657924/1883.6108170/1881.8894643/1881.1705
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002606
(v2.0)
Apoo68316
182/790.6843123/790.517286/795.256872/794.752163/791.6799148/790.3029
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002606
(v2.0)
Apoo68316
45.893611938.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002606
(v2.0)
Apoo68316
14.57088616.94
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002716
(v1.0)
ApooNM_001199337,NM_001199338,NM_001199339,NM_02667368316
58.612136.78516.8576910.51013.90646
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002716
(v1.0)
ApooFR074821,NM_001199337,NM_001199338,NM_001199339,NM_02667368316
0.824280.5815220.1469910.3277630.189587
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002716
(v1.0)
ApooNM_001199337,NM_001199338,NM_001199339,NM_02667368316
61.28442.7424540.1334
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002716
(v1.0)
ApooNM_001199337,NM_001199338,NM_001199339,NM_02667368316
59.819636.415834.5618
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002716
(v1.0)
ApooFR074821,NM_001199337,NM_001199338,NM_001199339,NM_02667368316
0.5905610.737651
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002716
(v1.0)
ApooNM_001199337,NM_001199338,NM_001199339,NM_02667368316
61.322.7048937.9063
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002716
(v1.0)
ApooNM_001199337,NM_001199338,NM_001199339,NM_02667368316
6.3491510.147914.9982
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002716
(v1.0)
ApooFR074821,NM_001199337,NM_001199338,NM_001199339,NM_02667368316
0.3242370.734961
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002716
(v1.0)
ApooNM_001199337,NM_001199338,NM_001199339,NM_02667368316
30.92426.62285
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002716
(v1.0)
ApooNM_001199337,NM_001199338,NM_001199339,NM_02667368316
16.295516.5184
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002716
(v1.0)
10848H3104D10-3Mm.286280610008C08Rik68316
U020020NAP098324-001TC926473Q9DCZ43.41273.6954.0653.68573.18853.48883.1648
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002716
(v1.0)
1452800_a_atMm.379156ApooNM_001199337.1,NM_001199339.1,NM_001199338.1,NM_026673.468316
5377.253952.252164.3251293.6751581.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002716
(v1.0)
A_51_P2656850610008C08RikNM_02667368316
11P0.9350.624P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002716
(v1.0)
Apoo68316
3326715