DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002884
GeneArpc1b
SynonymsL72
p41-ARC
SOP2Hs
Desc.actin related protein 2/3 complex, subunit 1B
LocusNM_023142 chr5:145875125-145889055(+)
DB links


Entrez 11867
MGI 1343142
Ensembl ENSMUSG00000029622
Vega OTTMUSG00000022984
Featureprotein-coding
GO(BP)
  •   1 Terms
      regulation of actin filament polymerization (GO:0030833)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
      Fc gamma R-mediated phagocytosis (mmu04666)
      Regulation of actin cytoskeleton (mmu04810)
      Bacterial invasion of epithelial cells (mmu05100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002780
(v2.0)
Arpc1bNM_02314211867
361.40486.9485114.0029.1042956.571993.3662199.011158.36759.060986.1491
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002884
(v1.0)
Arpc1b11867
Maternal RNA0.86353
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002780
(v2.0)
Arpc1b11867
776/5220.0591418/522-0.4358123/5221.4942265/5220.351727/522-2.1742215/522-1.8717
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002780
(v2.0)
Arpc1b11867
389/1930.4962170/193-0.2976101/1932.5931202/1931.385514/193-1.6586108/193-1.4243
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002780
(v2.0)
Arpc1b11867
78.106314055.79
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002780
(v2.0)
Arpc1b11867
22.26278127.48
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002884
(v1.0)
Arpc1bNM_02314211867
90.395779.28176.7805539.1893142.099
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002884
(v1.0)
Arpc1bNM_02314211867
104.77885.51959.2949845.0177161.959
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002884
(v1.0)
Arpc1bNM_02314211867
94.517132.16986.4981
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002884
(v1.0)
Arpc1bNM_02314211867
92.257978.4857117.647
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002884
(v1.0)
Arpc1bNM_02314211867
296.238244.683
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002884
(v1.0)
Arpc1bNM_02314211867
94.5719130.359129.031
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002884
(v1.0)
Arpc1bNM_02314211867
6.2777337.838841.0938
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002884
(v1.0)
Arpc1bNM_02314211867
47.518759.3158
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002884
(v1.0)
Arpc1bNM_02314211867
33.5172.48239
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002884
(v1.0)
Arpc1bNM_02314211867
93.629194.9376
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002884
(v1.0)
1159C0182B07-3Mm.30010Arpc1b11867
U039410NAP095811-001Arpc1b;TC921594,TC819100,TC819094,TC819093,TC819092,TC806651Q9CRC4U,F,24.07323.92113.42363.72453.94774.26284.5157
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002884
(v1.0)
1416226_atMm.30010Arpc1bNM_023142.211867
665.31109.3258.8538.4751331.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002884
(v1.0)
A_51_P331279Arpc1bNM_02314211867
11P0.8390.33P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002884
(v1.0)
Arpc1b11867
21.33221.333