DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002952
GeneAsf1b
Synonyms
Desc.ASF1 anti-silencing function 1 homolog B (S. cerevisiae)
LocusNM_024184 chr8:86479593-86494094(+)
DB links


Entrez 66929
MGI 1914179
Ensembl ENSMUSG00000005470
Vega OTTMUSG00000017288
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002848
(v2.0)
Asf1bNM_02418466929
5.6425596.5179206.747.54624.149419.178926.8909222.1418.715217.3806
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002952
(v1.0)
Asf1b66929
Minor ZGA0.99542
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002848
(v2.0)
Asf1b66929
621/3920.1506378/392-0.1682224/3922.7562508/3921.698971/392-0.4022395/392-0.5865
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002848
(v2.0)
Asf1b66929
326/1800.3424146/180-0.4156215/1803.77476/1802.717213/180-1.659747/180-2.4988
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002848
(v2.0)
Asf1b66929
40.497213530
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002848
(v2.0)
Asf1b66929
17.76511016.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002952
(v1.0)
Asf1bNM_02418466929
100.335143.04735.396516.669119.2238
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002952
(v1.0)
Asf1bNM_02418466929
125.066157.46940.748219.442923.1078
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002952
(v1.0)
Asf1bNM_02418466929
104.9092.06354156.068
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002952
(v1.0)
Asf1bNM_02418466929
102.402141.611164.38
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002952
(v1.0)
Asf1bNM_02418466929
159.907189.705
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002952
(v1.0)
Asf1bNM_02418466929
104.972.03528180.287
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002952
(v1.0)
Asf1bNM_02418466929
32.771716.094712.9798
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002952
(v1.0)
Asf1bNM_02418466929
19.233715.9411
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002952
(v1.0)
Asf1bNM_02418466929
28.325323.0357
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002952
(v1.0)
Asf1bNM_02418466929
196.341207.448
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002952
(v1.0)
7714H3052H03-51700003K02Rik66929
U009561NAP003768-0011700003K02Rik;TC830817Q9DAP7U,F,23.99833.8953.85123.8394.13053.96654.1075
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002952
(v1.0)
1423714_atMm.29680Asf1bNM_024184.266929
1220.32064.175847.3223.775378.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002952
(v1.0)
A_51_P330213Asf1bNM_02418466929
11P1.1830.342P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002952
(v1.0)
Asf1b66929
010010