DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002967
GeneAspm
SynonymsAspm
Calmbp1
MCPH5
Sha1
Desc.asp (abnormal spindle)-like, microcephaly associated (Drosophila)
LocusNM_009791 chr1:141351350-141390665(+)
DB links


Entrez 12316
MGI 1334448
Ensembl ENSMUSG00000033952
Vega OTTMUSG00000019630
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002868
(v2.0)
AspmNM_00979112316
0.154819115.245111.10613.15587.949988.913399.2975186.722110.6867.05679
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002967
(v1.0)
Aspm12316
Maternal RNA0.99881
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002868
(v2.0)
Aspm12316
647/3650.3123552/3650.4795146/3652.2418484/3651.731595/3650.1146421/365-0.3922
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002868
(v2.0)
Aspm12316
326/1580.5293251/1580.5487140/1583.3301455/1582.837665/1580.7609258/1580.1074
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002868
(v2.0)
Aspm12316
78.252415151.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002868
(v2.0)
Aspm12316
14.63548417.42
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002967
(v1.0)
AspmNM_00979112316
119.73576.89939.786325.49166.53706
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002967
(v1.0)
AspmFR270209,NM_00979112316
3247.952013.83198.91671.334694.2697
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002967
(v1.0)
AspmNM_00979112316
125.1940.05661983.8988
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002967
(v1.0)
AspmNM_00979112316
122.20276.127164.3861
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002967
(v1.0)
AspmFR270209,NM_00979112316
1947.861653.11
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002967
(v1.0)
AspmNM_00979112316
125.2670.055843570.6166
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002967
(v1.0)
AspmNM_00979112316
9.060615.302367.43502
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002967
(v1.0)
AspmFR270209,NM_00979112316
56.833872.6733
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002967
(v1.0)
AspmNM_00979112316
92.537312.2456
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002967
(v1.0)
AspmNM_00979112316
7.183357.62526
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002967
(v1.0)
13111H3158C12-3Mm.168523Calmbp112316
U042215NAP006458-001Asp;Calmbp1;TC936855O88482U,F,23.01172.94852.57822.95792.62252.8772.9211
0002967
(v1.0)
14100J0409B01-3Mm.168523Calmbp112316
U042215NAP006458-001Asp;Calmbp1;TC936855O88482U,F,24.20774.51983.72663.85873.19883.48163.4126
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002967
(v1.0)
1422814_atMm.168523AspmNM_009791.412316
4727.65881.5751424.675204.375208.95
0002967
(v1.0)
1452459_atMm.168523AspmNM_009791.412316
143215.15173.4250165.475
0002967
(v1.0)
1458560_atMm.168523AspmNM_009791.412316
219.175382.4163.5750204
0002967
(v1.0)
1458873_atMm.168523AspmNM_009791.412316
313.2408.05339.8250232.65
0002967
(v1.0)
1441520_atMm.168523AspmNM_009791.412316
0419.525000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002967
(v1.0)
A_51_P217778Calmbp1NM_00979112316
11P0.4770.146P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002967
(v1.0)
Aspm12316
120130