DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002970
GeneAspscr1
SynonymsASPC
ASPCR1
ASPL
RCC17
TUG
Desc.alveolar soft part sarcoma chromosome region, candidate 1 (human)
LocusNM_026877 chr11:120534287-120570760(+)
NM_001164224 chr11:120537975-120570760(+)
NM_198223 chr11:120537975-120570760(+)
DB links


Entrez 68938
MGI 1916188
Ensembl ENSMUSG00000025142
Vega OTTMUSG00000004078
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002871
(v2.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
44.198627.381324.96068.5426215.098822.77113.657629.881512.847724.605
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002970
(v1.0)
Aspscr168938
Maternal RNA0.93154
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002871
(v2.0)
Aspscr168938
702/525-0.0935417/525-0.4475148/5251.7511477/5251.189122/525-2.4662217/525-1.8667
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002871
(v2.0)
Aspscr168938
277/220-0.1796166/220-0.51979/220-0.935862/220-0.48924/220-3.428780/220-2.0383
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002871
(v2.0)
Aspscr168938
53.66889357.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002871
(v2.0)
Aspscr168938
19.2445833.18
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002970
(v1.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
28.470217.37566.3590310.47629.68786
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002970
(v1.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
272.966203.01369.2434111.161112.76
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002970
(v1.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
29.768216.163918.9572
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002970
(v1.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
29.056717.201222.1598
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002970
(v1.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
471.787628.739
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002970
(v1.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
29.785515.942524.3041
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002970
(v1.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
5.8874710.11528.92523
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002970
(v1.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
58.997779.9315
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002970
(v1.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
1.670060.241107
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002970
(v1.0)
Aspscr1NM_001164224,NM_026877,NM_19822368938
21.31468.63046
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002970
(v1.0)
6673H3031A05-3Mm.1423541190006K01Rik68938
U013672NAP005694-0011190006K01Rik;TC913890,TC913887,TC913886,TC913882,TC913878,TC913876Q9CT64U,F,23.08663.10062.83332.86572.85862.90282.8659
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002970
(v1.0)
1423912_atMm.294020Aspscr1NM_026877.2,NM_198223.2,NM_001164224.168938
207.05172.2106.1250102.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002970
(v1.0)
A_51_P121652Aspscr1NM_02687768938
11P0.1270.0307P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002970
(v1.0)
Aspscr168938
3.6796112210