DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003000
GeneAtg12
SynonymsApg12l
Desc.autophagy related 12
LocusNM_026217 chr18:46892071-46901233(-)
DB links


Entrez 67526
MGI 1914776
Ensembl ENSMUSG00000032905
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
      Regulation of autophagy (mmu04140)
      RIG-I-like receptor signaling pathway (mmu04622)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002905
(v2.0)
Atg12NM_02621767526
18.950884.502583.272450.790464.209227.375512.118371.438249.918927.5334
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003000
(v1.0)
Atg1267526
Maternal RNA0.96792
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002905
(v2.0)
Atg1267526
699/3680.4118477/3680.2574306/3683.2928813/3682.466878/368-0.1782332/368-0.7452
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002905
(v2.0)
Atg1267526
381/1610.7264229/1610.39298/1614.3893784/1613.594536/161-0.1005149/161-0.7054
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002905
(v2.0)
Atg1267526
69.325115445.02
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002905
(v2.0)
Atg1267526
13.02579413.86
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003000
(v1.0)
Atg12NM_02621767526
87.809857.473737.808344.43578.53318
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003000
(v1.0)
Atg12NM_02621767526
105.90162.772142.472851.29589.90162
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003000
(v1.0)
Atg12NM_02621767526
91.81326.9305162.705
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003000
(v1.0)
Atg12NM_02621767526
89.618756.896652.848
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003000
(v1.0)
Atg12NM_02621767526
63.749959.8493
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003000
(v1.0)
Atg12NM_02621767526
91.86656.8355957.962
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003000
(v1.0)
Atg12NM_02621767526
35.004642.904534.4685
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003000
(v1.0)
Atg12NM_02621767526
50.742740.6873
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003000
(v1.0)
Atg12NM_02621767526
14.563811.8066
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003000
(v1.0)
Atg12NM_02621767526
27.345822.3207
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003000
(v1.0)
14307J0442F08-3Mm.9852Apg12l67526
U038413NAP094998-001Apg12l;TC793295Q9CQY1U,F,23.61393.64333.22143.48313.11193.28753.1661
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003000
(v1.0)
1451747_a_atMm.9852Atg12NM_026217.367526
569.2459.25232.3250161.325
0003000
(v1.0)
1439457_x_atMm.9852Atg12NM_026217.367526
56.75110.9563.45158.07548.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003000
(v1.0)
A_51_P197378Atg12lNM_02621767526
11P0.5130.095P
0003000
(v1.0)
A_52_P579719Atg12lNM_02621767526
11P0.7430.219P
0003000
(v1.0)
A_52_P579726Atg12lNM_02621767526
11P0.9320.721P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003000
(v1.0)
Atg1267526
021021