DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003001
GeneAtg13
SynonymsD2Ertd391e
Desc.autophagy related 13
LocusNM_145528 chr2:91514769-91550749(-)
DB links


Entrez 51897
MGI 1196429
Ensembl ENSMUSG00000027244
Vega OTTMUSG00000014308
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002906
(v2.0)
Atg13NM_14552851897
17.04526.691569.1040819.214155.512611.357511.419410.085937.98929.69542
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003001
(v1.0)
Atg1351897
MGA0.9498
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002906
(v2.0)
Atg1351897
594/3580.2171474/3580.288283/3583.2189661/3582.208113/358-2.635483/358-2.6861
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002906
(v2.0)
Atg1351897
334/1570.5733221/1570.375281/1574.3386645/1573.34914/157-2.952734/157-2.7528
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002906
(v2.0)
Atg1351897
50.824813836.83
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002906
(v2.0)
Atg1351897
21.65710620.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003001
(v1.0)
Atg13NM_14552851897
7.015666.3508214.397638.72898.11008
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003001
(v1.0)
Atg13NM_14552851897
7.335526.287726.92888
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003001
(v1.0)
Atg13NM_14552851897
7.160196.287057.53897
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003001
(v1.0)
Atg13FR049416,FR319145,NM_14552851897
95.950989.8154
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003001
(v1.0)
Atg13NM_14552851897
7.339786.20168.26848
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003001
(v1.0)
Atg13NM_14552851897
13.329937.394326.4003
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003001
(v1.0)
Atg13FR049416,FR319145,NM_14552851897
195.882118.936
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003001
(v1.0)
Atg13NM_14552851897
0.8221348.65699
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003001
(v1.0)
Atg13NM_14552851897
0.03133260.0323335
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003001
(v1.0)
7590H3050D11-3Mm.28492D2Ertd391e51897
U023027NAP110606-1D2Ertd391e;TC904261,TC898889Q91YI1U,F,23.44873.52383.81514.0773.73593.8853.9871
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003001
(v1.0)
1454984_atMm.28492Atg13NM_145528.251897
000083.05
Agilent44K N/A
Proteome N/A