DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003035
GeneAtp13a1
SynonymsAtp13a
catp
Cgi152
Desc.ATPase type 13A1
LocusNM_133224 chr8:72315062-72331647(+)
DB links


Entrez 170759
MGI 2180801
Ensembl ENSMUSG00000031862
Featureprotein-coding
GO(BP)
GO(MF)
  •   7 Terms
      nucleotide binding (GO:0000166)
      ATP binding (GO:0005524)
      ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism (GO:0015662)
      hydrolase activity (GO:0016787)
      hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances (GO:0016820)
      ATPase activity (GO:0016887)
      metal ion binding (GO:0046872)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002940
(v2.0)
Atp13a1NM_133224170759
13.893632.88367.057649.8278916.177820.33631.892611.488316.945216.6011
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003035
(v1.0)
Atp13a1170759
Maternal RNA0.92799
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002940
(v2.0)
Atp13a1170759
566/3620.1316361/362-0.1198156/3622.3483332/3621.20088/362-3.288687/362-2.6353
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002940
(v2.0)
Atp13a1170759
339/1840.367183/184-0.1234151/1843.2333320/1842.11466/184-2.690746/184-2.5604
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002940
(v2.0)
Atp13a1170759
56.171712246.04
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002940
(v2.0)
Atp13a1170759
24.44838827.78
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003035
(v1.0)
Atp13a1NM_133224170759
34.19824.906947.3139711.19822.6945
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003035
(v1.0)
Atp13a1FR161707,NM_133224170759
273.56639.959140.858149.259272.757
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003035
(v1.0)
Atp13a1NM_133224170759
35.75735.081035.35358
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003035
(v1.0)
Atp13a1NM_133224170759
34.90274.857678.52739
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003035
(v1.0)
Atp13a1FR161707,NM_133224170759
62.391490.9775
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003035
(v1.0)
Atp13a1NM_133224170759
35.77815.011449.35256
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003035
(v1.0)
Atp13a1NM_133224170759
6.771610.812111.757
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003035
(v1.0)
Atp13a1FR161707,NM_133224170759
135.273182.186
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003035
(v1.0)
Atp13a1NM_133224170759
5.176925.10857
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003035
(v1.0)
Atp13a1NM_133224170759
6.403472.99836
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003035
(v1.0)
5884H3011D12-3Mm.27518catp170759
U009407NAP009633-001catp;TC926141,TC821872Q9EPE93.5953.60553.68663.64113.50923.66053.5922
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003035
(v1.0)
1417475_atMm.186066Atp13a1NM_133224.2170759
207.9151.325174.750205.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003035
(v1.0)
A_51_P431649Atp13a1NM_133224170759
11P1.5490.143P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003035
(v1.0)
Atp13a1170759
210210