DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003089
GeneAtp6v1a
SynonymsAtp6a1
lysosomal 70kDa
VA68
VPP2
Desc.ATPase, H+ transporting, lysosomal V1 subunit A
LocusNM_007508 chr16:44085517-44139132(-)
DB links


Entrez 11964
MGI 1201780
Ensembl ENSMUSG00000052459
Vega OTTMUSG00000023485
Featureprotein-coding
GO(BP)
GO(MF)
  •   5 Terms
      nucleotide binding (GO:0000166)
      ATP binding (GO:0005524)
      hydrolase activity (GO:0016787)
      hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances (GO:0016820)
      proton-transporting ATPase activity, rotational mechanism (GO:0046961)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002994
(v2.0)
Atp6v1aNM_00750811964
107.45429.147947.435837.439545.351856.601441.799339.233639.17851.0134
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003089
(v1.0)
Atp6v1a11964
Minor ZGA0.96607
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002994
(v2.0)
Atp6v1a11964
720/3390.5725534/3390.538259/3393.1676707/3392.383116/339-2.2775151/339-1.7559
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002994
(v2.0)
Atp6v1a11964
435/1630.8992267/1630.5928257/1634.16663/1633.33555/163-2.742485/163-1.522
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002994
(v2.0)
Atp6v1a11964
32.995416919.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002994
(v2.0)
Atp6v1a11964
9.66661347.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003089
(v1.0)
Atp6v1aNM_00750811964
30.289932.848827.875931.460229.4056
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003089
(v1.0)
Atp6v1aNM_00750811964
177.293202.757179.855187.446174.489
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003089
(v1.0)
Atp6v1aNM_00750811964
31.670939.297235.8388
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003089
(v1.0)
Atp6v1aNM_00750811964
30.91432.51929.0325
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003089
(v1.0)
Atp6v1aNM_00750811964
306.902311.083
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003089
(v1.0)
Atp6v1aNM_00750811964
31.689338.758931.8419
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003089
(v1.0)
Atp6v1aNM_00750811964
25.808730.376127.0016
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003089
(v1.0)
Atp6v1aNM_00750811964
241.02190.45
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003089
(v1.0)
Atp6v1aNM_00750811964
25.962324.5106
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003089
(v1.0)
Atp6v1aNM_00750811964
4.139269.45212
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003089
(v1.0)
1267C0191H09-3Mm.29771Atp6v1a111964
2.93973.10163.10393.26763.03413.43993.458
0003089
(v1.0)
10219H3092H01-3Mm.29771Atp6v1a111964
U037061NAP012037-001Atp6v1a1;TC897409P50516U,F,23.42063.25093.31353.70323.453.88483.9535
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003089
(v1.0)
1450634_atMm.217787Atp6v1aNM_007508.511964
208.825511.05320.475214.475448.8
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003089
(v1.0)
Atp6v1a11964
14229394515