DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003122
GeneAtrx
SynonymsDXHXS6677E
HP1-BP38
Hp1bp2
Rad54
XH2
Xnp
Desc.alpha thalassemia/mental retardation syndrome X-linked homolog (human)
LocusNM_009530 chrX:102992956-103124711(-)
DB links


Entrez 22589
MGI 103067
Ensembl ENSMUSG00000031229
Vega OTTMUSG00000018268
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003026
(v2.0)
AtrxNM_00953022589
7.0238565.113172.068451.538545.707526.858424.663241.210559.959524.6642
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003122
(v1.0)
Atrx22589
Maternal RNA0.91014
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003026
(v2.0)
Atrx22589
396/2070.4213258/2070.2006136/2072.9234483/2072.539230/207-0.7102211/207-0.5684
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003026
(v2.0)
Atrx22589
197/910.5961132/910.4164126/913.9014396/913.417111/91-0.929672/91-0.9229
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003026
(v2.0)
Atrx22589
29.35838733.75
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003026
(v2.0)
Atrx22589
7.15834914.61
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003122
(v1.0)
AtrxNM_00953022589
67.641749.797738.350331.687117.0804
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003122
(v1.0)
AtrxNM_00953022589
732.043654.131454.044211.109135.167
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003122
(v1.0)
AtrxNM_00953022589
70.72562.5686954.3304
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003122
(v1.0)
AtrxNM_00953022589
69.035249.297730.5398
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003122
(v1.0)
AtrxNM_00953022589
531.888193.981
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003122
(v1.0)
AtrxNM_00953022589
70.76672.5335133.4951
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003122
(v1.0)
AtrxNM_00953022589
35.506430.595241.4444
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003122
(v1.0)
AtrxNM_00953022589
189.771241.592
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003122
(v1.0)
AtrxNM_00953022589
97.455563.4232
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003122
(v1.0)
AtrxNM_00953022589
13.140330.3596
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003122
(v1.0)
4865G0110B04-3Mm.10141Atrx22589
U039624NAP109077-1Atrx;Xnp;TC892138Q61687U,F,23.18743.03212.66662.79422.6942.80522.7804
0003122
(v1.0)
6331H3023B10-3Atrx22589
U039624NAP000535-002Atrx;Xnp;TC892140,TC892138Q61687U,F,23.12.92652.76432.87132.57672.77932.8065
0003122
(v1.0)
10685H3102B08-3Mm.10141Atrx22589
TC8921403.39933.34923.09633.17143.19783.17713.1734
0003122
(v1.0)
11053H3107F11-3Mm.10141Atrx22589
U033460NAP015050-001TC8921352.38772.4292.37832.38422.31592.36422.4056
0003122
(v1.0)
15014J1008A07-3Mm.10141Atrx22589
U033460NAP015050-001TC8921352.36062.31222.39012.38382.27762.37732.4172
0003122
(v1.0)
18581L0215H10-3Mm.141130ATRXU039624NAP010064-001Atrx;Xnp;Q61687U,F,23.81523.76963.21383.19883.40683.38363.4563
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003122
(v1.0)
1420945_atMm.485836AtrxNM_009530.222589
000030
0003122
(v1.0)
1453734_atMm.485836AtrxNM_009530.222589
374.5389.65179.975168.5750
0003122
(v1.0)
1433537_atMm.485836AtrxNM_009530.222589
3710.453523.0516141244.2251534.975
0003122
(v1.0)
1438750_atMm.485836AtrxNM_009530.222589
00163956.8430.575
Agilent44K N/A
Proteome N/A