DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003248
GeneBC005624
Synonyms
Desc.cDNA sequence BC005624
LocusNM_144885 chr2:30828353-30837461(-)
DB links


Entrez 227707
MGI 2385132
Ensembl ENSMUSG00000026851
Vega OTTMUSG00000011874
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003147
(v2.0)
BC005624NM_144885227707
32.702239.949734.372717.056626.669532.638122.812435.469725.017839.2699
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003248
(v1.0)
BC005624227707
Maternal RNA0.91044
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003147
(v2.0)
BC005624227707
736/4660.1463408/466-0.3072175/4662.1592376/4661.017725/466-2.1188202/466-1.7976
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003147
(v2.0)
BC005624227707
369/1980.3836194/198-0.1449165/1983.2609346/1982.12258/198-2.431785/198-1.8011
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003147
(v2.0)
BC005624227707
60.410215838.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003147
(v2.0)
BC005624227707
17.41959318.73
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003248
(v1.0)
BC005624NM_144885227707
41.521923.887112.693718.536916.0738
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003248
(v1.0)
BC005624NM_144885227707
83.483230.24225.5422.348546.21
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003248
(v1.0)
BC005624NM_144885227707
43.41511.959526.0613
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003248
(v1.0)
BC005624NM_144885227707
42.377323.647226.3076
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003248
(v1.0)
BC005624NM_144885227707
6.722210.2859
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003248
(v1.0)
BC005624NM_144885227707
43.440211.795728.8533
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003248
(v1.0)
BC005624NM_144885227707
11.752417.898117.3307
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003248
(v1.0)
BC005624NM_144885227707
5.934286.30703
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003248
(v1.0)
BC005624NM_144885227707
27.361411.1585
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003248
(v1.0)
BC005624NM_144885227707
4.092741.15186
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003248
(v1.0)
1423789_atMm.235238BC005624NM_144885.2227707
166.275059.90129.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003248
(v1.0)
A_51_P494567BC005624NM_144885227707
11P1.3920.207P
Proteome N/A