DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003409
GeneBbs9
SynonymsEST 3159894
Desc.Bardet-Biedl syndrome 9 (human)
LocusNM_178415 chr9:22280159-22692724(+)
NM_181316 chr9:22280159-22692724(+)
DB links


Entrez 319845
MGI 2442833
Ensembl ENSMUSG00000035919
Vega OTTMUSG00000031157
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003288
(v2.0)
Bbs9NM_178415,NM_181316319845
6.2740224.615265.894581.709860.68523.51443.4393961.243561.3373.8775
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003409
(v1.0)
Bbs9319845
2-Cell Transient0.85879
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003288
(v2.0)
Bbs9319845
499/395-0.1752456/3950.090875/3951.1796292/3950.891236/395-1.3736279/395-1.0968
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003288
(v2.0)
Bbs9319845
210/176-0.2564216/1760.178369/1762.1747256/1761.85715/176-1.435465/176-2.0113
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003288
(v2.0)
Bbs9319845
54.629613241.39
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003288
(v2.0)
Bbs9319845
14.08916920.42
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003409
(v1.0)
Bbs9NM_178415,NM_181316319845
25.583845.610260.898142.14912.39714
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003409
(v1.0)
Bbs9NM_178415,NM_181316319845
66.627987.845592.279866.956410.0676
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003409
(v1.0)
Bbs9NM_178415,NM_181316319845
26.75022.2944849.7617
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003409
(v1.0)
Bbs9NM_178415,NM_181316319845
26.110945.152245.2792
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003409
(v1.0)
Bbs9NM_178415,NM_181316319845
93.080479.3405
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003409
(v1.0)
Bbs9NM_178415,NM_181316319845
26.76582.2630549.6608
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003409
(v1.0)
Bbs9NM_178415,NM_181316319845
56.382140.696642.3349
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003409
(v1.0)
Bbs9NM_178415,NM_181316319845
66.585263.4476
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003409
(v1.0)
Bbs9NM_178415,NM_181316319845
16.1450.4796
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003409
(v1.0)
Bbs9NM_178415,NM_181316319845
14.093610.4831
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003409
(v1.0)
1427341_atMm.176725Bbs9NM_178415.1,NM_181316.4319845
85.175114.72594.4500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003409
(v1.0)
A_52_P674196E130103I17RikNM_181316319845
11P1.0770.593P
Proteome N/A