DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003485
GeneBfar
SynonymsRNF47
Desc.bifunctional apoptosis regulator
LocusNM_001177552 chr16:13671951-13703705(+)
NM_025976 chr16:13671951-13703705(+)
DB links


Entrez 67118
MGI 1914368
Ensembl ENSMUSG00000022684
Vega OTTMUSG00000028685
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003366
(v2.0)
BfarNM_001177552,NM_025653,NM_02597667118
11.1603113.761246.00845.52227.062310.682912.2256163.931.817613.6619
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003485
(v1.0)
BfarMinor ZGA0.99841
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003366
(v2.0)
Bfar67118
669/483-0.0427477/483-0.1339357/4833.1332889/4832.20568/483-3.7006114/483-2.6663
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003366
(v2.0)
Bfar67118
275/221-0.1965202/221-0.2447226/2213.5626546/2212.62244/221-3.435169/221-2.2539
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003366
(v2.0)
Bfar67118
34.303515222.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003366
(v2.0)
Bfar67118
11.97287515.96
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003485
(v1.0)
BfarNM_001177552,NM_025653,NM_02597667118
118.235170.40833.903918.77168.54856
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003485
(v1.0)
BfarNM_001177552,NM_025653,NM_02597667118
192.045261.14949.165621.705610.7958
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003485
(v1.0)
BfarNM_001177552,NM_025653,NM_02597667118
123.6254.08168185.919
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003485
(v1.0)
BfarNM_001177552,NM_025653,NM_02597667118
120.67168.697121.408
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003485
(v1.0)
BfarNM_001177552,NM_025653,NM_02597667118
187.619137.12
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003485
(v1.0)
BfarNM_001177552,NM_025653,NM_02597667118
123.6974.02578133.156
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003485
(v1.0)
BfarNM_001177552,NM_025653,NM_02597667118
31.389718.124721.9739
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003485
(v1.0)
BfarNM_001177552,NM_025653,NM_02597667118
21.470825.9053
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003485
(v1.0)
BfarNM_001177552,NM_025653,NM_02597667118
67.474113.8403
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003485
(v1.0)
BfarNM_001177552,NM_025653,NM_02597667118
135.585129.958
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003485
(v1.0)
22120L0942D07-3Mm.366853010001A07Rik67118
U016828NAP005636-0013010001A07Rik;TC870214,TC854284Q9CXY33.42233.20233.13673.25533.64963.39573.416
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003485
(v1.0)
1426488_atMm.223689BfarNM_025976.5,NM_001177552.1,NM_025653.267118
122.050000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003485
(v1.0)
A_51_P511691BfarNM_02597667118
11P0.8780.417P
0003485
(v1.0)
A_52_P599038BfarNM_02597667118
11P1.4030.234P
Proteome N/A