DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003547
GeneBms1
SynonymsBms1l
Desc.BMS1 homolog, ribosome assembly protein (yeast)
LocusNM_194339 chr6:118333399-118369435(-)
DB links


Entrez 213895
MGI 2446132
Ensembl ENSMUSG00000030138
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003428
(v2.0)
Bms1NM_194339213895
12.6461128.73547.362328.834631.399221.471714.154252.261833.504124.8854
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003547
(v1.0)
Bms1213895
Maternal RNA0.99699
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003428
(v2.0)
Bms1213895
730/4050.3364508/4050.2102106/4051.6382288/4050.835555/405-0.8114470/405-0.3835
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003428
(v2.0)
Bms1213895
423/1900.6391230/1900.158699/1902.5858261/1901.77596/190-2.73692/190-1.6297
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003428
(v2.0)
Bms1213895
46.167911639.8
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003428
(v2.0)
Bms1213895
18.92548721.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003547
(v1.0)
Bms1NM_194339213895
133.78732.822421.441421.76929.92771
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003547
(v1.0)
Bms1NM_194339213895
417.11974.008494.08294.124437.3345
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003547
(v1.0)
Bms1NM_194339213895
139.8864.6248235.81
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003547
(v1.0)
Bms1NM_194339213895
136.54332.492938.9014
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003547
(v1.0)
Bms1NM_194339213895
268.086291.084
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003547
(v1.0)
Bms1NM_194339213895
139.9684.5614742.6657
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003547
(v1.0)
Bms1NM_194339213895
19.851421.01923.2402
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003547
(v1.0)
Bms1NM_194339213895
261.837332.518
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003547
(v1.0)
Bms1NM_194339213895
250.65326.8723
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003547
(v1.0)
Bms1NM_194339213895
6.509227.44441
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003547
(v1.0)
277C0032A04-3Mm.221307LOC213895213895
LOC2138953.02143.29013.04653.03062.76412.91062.8422
0003547
(v1.0)
15683K0225E02-3Mm.25269LOC213895213895
U027788NAP003010-002TC858826U,F,23.09463.13382.83322.98682.86862.83832.7737
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003547
(v1.0)
1433636_atMm.25269Bms1NM_194339.1213895
631.55388.525156.32595.3136.45
0003547
(v1.0)
1447679_s_atMm.25269Bms1NM_194339.1213895
21073.9514309.1756734.9259316.7514439.725
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003547
(v1.0)
A_51_P278950Bms1lNM_194339213895
11P0.4440.104P
0003547
(v1.0)
A_52_P208600Bms1lNM_194339213895
11P0.3530.0869P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003547
(v1.0)
Bms1213895
001001