DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003587
GeneBrap
Synonyms
Desc.BRCA1 associated protein
LocusNM_028227 chr5:122110595-122137256(+)
DB links


Entrez 72399
MGI 1919649
Ensembl ENSMUSG00000029458
Vega OTTMUSG00000023519
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003468
(v2.0)
BrapNM_001289543,NM_001289544,NM_02822772399
28.315981.7171120.22186.025850.37645.5603823.2465144.25752.71245.15095
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003587
(v1.0)
Brap72399
Minor ZGA0.9172
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003468
(v2.0)
Brap72399
592/3970.0635389/397-0.1452177/3972.4004396/3971.322213/397-2.7829152/397-1.9737
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003468
(v2.0)
Brap72399
343/2110.1873227/211-0.0107173/2113.2422379/2112.162910/211-2.232192/211-1.7801
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003468
(v2.0)
Brap72399
74.942213157.21
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003468
(v2.0)
Brap72399
25.54557932.34
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003587
(v1.0)
BrapNM_02822772399
85.526383.934664.370435.107916.4667
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003587
(v1.0)
BrapNM_02822772399
118.157124.09293.827850.489130.2932
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003587
(v1.0)
BrapNM_02822772399
89.425610.383291.5744
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003587
(v1.0)
BrapNM_02822772399
87.288383.0918107.608
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003587
(v1.0)
BrapNM_02822772399
399.328497.068
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003587
(v1.0)
BrapNM_02822772399
89.477610.241118.021
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003587
(v1.0)
BrapNM_02822772399
59.59733.89836.6696
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003587
(v1.0)
BrapNM_02822772399
179.722187.319
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003587
(v1.0)
BrapNM_02822772399
46.916419.073
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003587
(v1.0)
BrapNM_02822772399
19.092916.3472
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003587
(v1.0)
22160L0944H05-3Mm.153372Brap72399
U006125NAP006030-001Brap;TC898501,TC898496Q9CXX8U,F,24.19914.22593.76953.79693.29423.50093.3094
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003587
(v1.0)
1416738_atMm.153372BrapNM_028227.272399
115.675239.525188.200
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003587
(v1.0)
A_52_P612165BrapNM_02822772399
11P0.3510.0869P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003587
(v1.0)
Brap72399
0.60.800.60.80