DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003619
GeneBsdc1
Synonyms
Desc.BSD domain containing 1
LocusNM_133889 chr4:129138923-129165676(+)
DB links


Entrez 100383
MGI 1913466
Ensembl ENSMUSG00000040859
Vega OTTMUSG00000009659
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003504
(v2.0)
Bsdc1NM_133889100383
21.316811.91219.62279.545367.0490915.01753.4185424.67884.6501516.768
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003619
(v1.0)
Bsdc1100383
Minor ZGA0.94502
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003504
(v2.0)
Bsdc1100383
608/465-0.1257401/465-0.329306/4652.9649736/4651.987928/465-1.9582242/465-1.5357
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003504
(v2.0)
Bsdc1100383
299/1940.1107182/194-0.2072296/1944.1279684/1943.13273/194-3.572872/194-2.0067
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003504
(v2.0)
Bsdc1100383
97.513214766.34
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003504
(v2.0)
Bsdc1100383
37.74868345.48
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003619
(v1.0)
Bsdc1NM_133889100383
12.388613.67177.120984.868812.34429
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003619
(v1.0)
Bsdc1FR127877,NM_133889100383
146.044127.36376.188378.562610.2603
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003619
(v1.0)
Bsdc1NM_133889100383
12.95347.7957614.9161
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003619
(v1.0)
Bsdc1NM_133889100383
12.643813.534418.2406
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003619
(v1.0)
Bsdc1FR127877,NM_133889100383
146.53550.7588
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003619
(v1.0)
Bsdc1NM_133889100383
12.9617.6889820.0056
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003619
(v1.0)
Bsdc1NM_133889100383
6.592914.701033.23762
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003619
(v1.0)
Bsdc1FR127877,NM_133889100383
101.87940.7972
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003619
(v1.0)
Bsdc1NM_133889100383
18.07916.05144
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003619
(v1.0)
Bsdc1NM_133889100383
2.216252.35302
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003619
(v1.0)
2679C0351F01-31110063F24Rik100383
1110063F24Rik4.2684.09713.76553.99714.56814.164.5627
0003619
(v1.0)
19450L0274B02-3Mm.179181110063F24Rik100383
1110063F24Rik3.33013.29563.19133.35613.19333.24763.2108
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003619
(v1.0)
1427270_a_atMm.17918Bsdc1NM_133889.2100383
326.7343.2329.775313.275230.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003619
(v1.0)
A_51_P398467Bsdc1NM_133889100383
11P0.8510.353P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003619
(v1.0)
Bsdc1100383
210530