DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003778
GeneC87499
Synonyms
Desc.expressed sequence C87499
LocusNM_198663 chr4:88273224-88280090(-)
NR_027385 chr4:88273224-88280090(-)
DB links


Entrez 381590
MGI 2140706
Ensembl ENSMUSG00000038330
Vega OTTMUSG00000007666
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003667
(v2.0)
C87499NM_198663,NR_027385381590
0308.446576.99632.61368.575520.02161230481.84915.7540
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003778
(v1.0)
C87499381590
Minor ZGA0.98807
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003667
(v2.0)
C87499381590
540/415-0.1326441/415-0.02856/415-2.3301130/415-0.341195/4150.96111332/4151.0812
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003667
(v2.0)
C87499381590
225/174-0.1411168/174-0.16583/174-1.939160/174-0.201685/1741.007604/1741.1915
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003667
(v2.0)
C87499381590
31.64573395.9
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003667
(v2.0)
C87499381590
20.71022294.14
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003778
(v1.0)
C87499NM_198663381590
316.897393.71421.96425.60790
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003778
(v1.0)
C87499NM_198663,NR_027385381590
765.277860.243.295510.68060
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003778
(v1.0)
C87499NM_198663381590
331.3450429.55
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003778
(v1.0)
C87499NM_198663381590
323.425389.761356.641
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003778
(v1.0)
C87499NM_198663,NR_027385381590
873.384834.92
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003778
(v1.0)
C87499NM_198663381590
331.5370391.152
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003778
(v1.0)
C87499NM_198663381590
20.33555.4146610.8239
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003778
(v1.0)
C87499NM_198663,NR_027385381590
6.7035413.1026
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003778
(v1.0)
C87499NM_198663381590
453.72920.937
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003778
(v1.0)
C87499NM_198663381590
746.736740.748
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003778
(v1.0)
1460611_atMm.377092~Mm.331698Ifna9~C87499NM_010507.1~NM_198663.315972
381590
7984.213487.451739.300
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003778
(v1.0)
A_52_P187183C87499NM_198663381590
11P0.8570.365P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003778
(v1.0)
C87499381590
011022.33