DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003886
GeneCand1
SynonymsD10Ertd516e
Desc.cullin associated and neddylation disassociated 1
LocusNM_027994 chr10:118635868-118677111(-)
DB links


Entrez 71902
MGI 1261820
Ensembl ENSMUSG00000020114
Vega OTTMUSG00000030921
Featureprotein-coding
GO(BP)
  •   7 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      protein ubiquitination (GO:0016567)
      cell differentiation (GO:0030154)
      negative regulation of catalytic activity (GO:0043086)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of RNA polymerase II transcriptional preinitiation complex assembly (GO:0045899)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003775
(v2.0)
Cand1NM_02799471902
13.042952.475977.6356150.897175.49821.723522.950266.7393159.9521.0223
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003886
(v1.0)
Cand171902
Major ZGA0.99192
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003775
(v2.0)
Cand171902
782/4220.3763493/4220.1079221/4222.6335464/4221.462762/422-0.7002472/422-0.4366
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003775
(v2.0)
Cand171902
457/1850.7886268/1850.4166209/1853.6923418/1852.49126/185-2.698386/185-1.6871
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003775
(v2.0)
Cand171902
46.664716628.11
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003775
(v2.0)
Cand171902
15.731110415.13
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003886
(v1.0)
Cand1NM_02799471902
54.54953.7645112.4121.67316.2315
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003886
(v1.0)
Cand1NM_02799471902
635.94612.0241334.511559.35213.189
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003886
(v1.0)
Cand1NM_02799471902
57.03594.7699158.6582
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003886
(v1.0)
Cand1NM_02799471902
55.672753.224649.456
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003886
(v1.0)
Cand1NM_02799471902
391.794241.742
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003886
(v1.0)
Cand1NM_02799471902
57.06914.7045754.2416
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003886
(v1.0)
Cand1NM_02799471902
104.065117.48110.479
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003886
(v1.0)
Cand1NM_02799471902
1218.6978.625
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003886
(v1.0)
Cand1NM_02799471902
42.628658.7961
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003886
(v1.0)
Cand1NM_02799471902
20.25618.83898
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003886
(v1.0)
9457H3081E09-3Mm.5300Tp120a-pending71902
U032271NAP099931-001Tip120A;Tp120a;TC881152Q9D5P6U,F,23.6683.89944.16924.0363.74793.96813.7489
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003886
(v1.0)
1428648_atMm.203965Cand1NM_027994.171902
669.95885.551365.3251912.975827.275
0003886
(v1.0)
1435781_atMm.203965Cand1NM_027994.171902
281.7259.9201.1751384.175719.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003886
(v1.0)
A_51_P479652Cand1XM_12590171902
11P1.8580.111P
0003886
(v1.0)
A_52_P161707Cand1AK03867371902
11P0.6740.158P
0003886
(v1.0)
A_52_P57308Cand1XM_12590171902
11P0.4930.0892P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003886
(v1.0)
Cand171902
9.6711.33521.6737.3315