DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003947
GeneCasc5
Synonyms
Desc.cancer susceptibility candidate 5
LocusNM_029617 chr2:118872855-118929857(+)
DB links


Entrez 76464
MGI 1923714
Ensembl ENSMUSG00000027326
Vega OTTMUSG00000015766
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003837
(v2.0)
Casc5NM_02961776464
0.23663118.556617.888338.152938.85066.361213.317910.284637.65383.90814
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003947
(v1.0)
Casc576464
Major ZGA0.99867
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003837
(v2.0)
Casc576464
640/4220.0878497/4220.1195164/4222.2054616/4221.870754/422-0.8961397/422-0.6854
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003837
(v2.0)
Casc576464
303/1670.3448234/1670.3685151/1673.3641576/1673.098431/167-0.3614189/167-0.4179
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003837
(v2.0)
Casc576464
60.55413046.58
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003837
(v2.0)
Casc576464
12.7197916.1
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003947
(v1.0)
Casc5NM_02961776464
19.276512.299828.378326.93789.43075
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003947
(v1.0)
Casc5NM_02961776464
23.9213.746854.513890.271111.2699
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003947
(v1.0)
Casc5NM_02961776464
20.15530.086538513.4193
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003947
(v1.0)
Casc5NM_02961776464
19.673612.17637.61417
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003947
(v1.0)
Casc5NM_02961776464
13.96318.94627
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003947
(v1.0)
Casc5NM_02961776464
20.1670.08535328.35096
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003947
(v1.0)
Casc5NM_02961776464
26.273926.009525.9779
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003947
(v1.0)
Casc5NM_02961776464
95.189870.9455
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003947
(v1.0)
Casc5NM_02961776464
9.8296125.03
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003947
(v1.0)
Casc5NM_02961776464
0.8776712.52061
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003947
(v1.0)
1430193_atMm.202518Casc5NM_029617.276464
451.15581.95446.275455.6468.075
0003947
(v1.0)
1438833_atMm.202518Casc5NM_029617.276464
144.775250.95232.775181.60
Agilent44K N/A
Proteome N/A