DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004053
GeneCcdc142
Synonyms
Desc.coiled-coil domain containing 142
LocusNM_001081266 chr6:83051510-83059115(+)
DB links


Entrez 243510
MGI 3045292
Ensembl ENSMUSG00000079511
Vega OTTMUSG00000024264
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003942
(v2.0)
Ccdc142NM_001081266,NM_026744243510
39.662254.689861.498534.124844.8911165.06338.800292.22756.6493203.821
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004053
(v1.0)
Ccdc142Maternal RNA0.92022
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003942
(v2.0)
Ccdc142243510
716/4080.2979385/408-0.1994151/4082.1343424/4081.3813134/4080.4475784/4080.3422
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003942
(v2.0)
Ccdc142243510
421/2100.4886201/210-0.1785142/2102.9656372/2102.142933/210-0.5973224/210-0.5034
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003942
(v2.0)
Ccdc142243510
47.312114033.79
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003942
(v2.0)
Ccdc142243510
15.866910415.26
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004053
(v1.0)
Ccdc142NM_001081266,NM_026744243510
56.86742.683625.416331.166127.6967
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004053
(v1.0)
Ccdc142NM_001081266,NM_026744243510
130.79646.033223.068741.383253.7841
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004053
(v1.0)
Ccdc142NM_001081266,NM_026744243510
59.459714.504946.5688
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004053
(v1.0)
Ccdc142NM_001081266,NM_026744243510
58.038642.255168.332
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004053
(v1.0)
Ccdc142NM_001081266,NM_026744243510
39.477766.5632
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004053
(v1.0)
Ccdc142NM_001081266,NM_026744243510
59.494314.306274.9442
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004053
(v1.0)
Ccdc142NM_001081266,NM_026744243510
23.531530.092139.4962
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004053
(v1.0)
Ccdc142NM_001081266,NM_026744243510
39.34760.2734
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004053
(v1.0)
Ccdc142NM_001081266,NM_026744243510
16.103429.7302
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004053
(v1.0)
Ccdc142NM_001081266,NM_026744243510
146.48687.761
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A