DBTMEE:0004114
| Gene | Ccdc50 |
| Synonyms | D16Bwg1543e |
| Description | coiled-coil domain containing 50 |
| Locus | NM_026202 UCSC: chr16:27389063-27452304(+) OLP: chr16:27389063-27452304(+)
NM_001025615 UCSC: chr16:27389063-27452304(+) OLP: chr16:27389063-27452304(+)
|
| DB links |
Entrez 67501
MGI 1914751
Ensembl ENSMUSG00000038127
Vega OTTMUSG00000023490
|
| Feature | protein-coding |
| GO_BP | |
| GO_MF | |
| GO_CC |
-
 1 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2004002 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0004114
(v1.0) | Ccdc50 | NM_001025615,NM_026202 | 67501
| 15.4641 | 21.1127 | 9.42459 | 3.96156 | 16.5931 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0004114
(v1.0) | Ccdc50 | NM_001025615,NM_026202 | 67501
| 16.1691 | 5.44033 | 23.0344 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0004114
(v1.0) | Ccdc50 | NM_001025615,NM_026202 | 67501
| 15.7827 | 20.9007 | 17.6815 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0004114
(v1.0) | Ccdc50 | NM_001025615,NM_026202 | 67501
| 16.1785 | 5.36582 | 19.3925 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0004114
(v1.0) | Ccdc50 | NM_001025615,NM_026202 | 67501
| 8.7257 | 3.82504 | 4.10647 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0004114
(v1.0) | Ccdc50 | NM_001025615,NM_026202 | 67501
| 13.77 | 7.13622 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0004114
(v1.0) | Ccdc50 | NM_001025615,NM_026202 | 67501
| 5.37516 | 2.86907 |
|
| NIA60mer |
N/A |
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0004114
(v1.0) | 1420522_at | Mm.258985 | Ccdc50 | NM_026202.3,NM_001025615.2 | 67501
| 256.1 | 290.05 | 356.6 | 90.475 | 103.2 |
0004114
(v1.0) | 1431072_a_at | Mm.258985 | Ccdc50 | NM_026202.3,NM_001025615.2 | 67501
| 168.225 | 139.5 | 168.6 | 0 | 109.05 |
0004114
(v1.0) | 1433995_s_at | Mm.258985 | Ccdc50 | NM_026202.3,NM_001025615.2 | 67501
| 104.525 | 0 | 102.725 | 136.55 | 282.425 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0004114
(v1.0) | A_51_P107438 | 2610529H08Rik | NM_026202 | 67501
| 1 | 1 | P | 0.973 | 0.842 | P |
0004114
(v1.0) | A_52_P181605 | 2610529H08Rik | NM_026202 | 67501
| 1 | 1 | P | 0.689 | 0.204 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0004114
(v1.0) | Ccdc50 | 67501
| 1 | 0 | 0 | 1 | 0 | 0 |
|
