DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004121
GeneCcdc59
SynonymsD10Ertd718e
Desc.coiled-coil domain containing 59
LocusNM_025602 chr10:105278535-105284566(+)
DB links


Entrez 52713
MGI 1289302
Ensembl ENSMUSG00000019897
Vega OTTMUSG00000032766
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004009
(v2.0)
Ccdc59NM_02560252713
16.86237.200224.585348.546268.292339.580923.218216.728452.152443.7271
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004121
(v1.0)
Ccdc5952713
MGA0.95626
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004009
(v2.0)
Ccdc5952713
719/4260.2418486/4260.0737166/4262.2095310/4260.868815/426-2.69192/426-2.7903
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004009
(v2.0)
Ccdc5952713
351/1620.5996216/1620.2972159/1623.4789280/1622.10363/162-3.318730/162-2.9701
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004009
(v2.0)
Ccdc5952713
76.360414253.77
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004009
(v2.0)
Ccdc5952713
18.5798322.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004121
(v1.0)
Ccdc59NM_02560252713
38.660517.067336.185247.281416.5188
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004121
(v1.0)
Ccdc59FR226988,NM_02560252713
46.27918.472540.650655.011320.1974
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004121
(v1.0)
Ccdc59NM_02560252713
40.42316.1666218.6208
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004121
(v1.0)
Ccdc59NM_02560252713
39.456916.895912.3948
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004121
(v1.0)
Ccdc59FR226988,NM_02560252713
18.756113.892
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004121
(v1.0)
Ccdc59NM_02560252713
40.44666.0821613.5942
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004121
(v1.0)
Ccdc59NM_02560252713
33.501945.652136.21
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004121
(v1.0)
Ccdc59FR226988,NM_02560252713
54.417943.343
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004121
(v1.0)
Ccdc59NM_02560252713
16.662358.1632
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004121
(v1.0)
Ccdc59NM_02560252713
13.511929.0593
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004121
(v1.0)
8957H3074F10-3Mm.33787D10Ertd718e52713
D10Ertd718e2.42852.47932.43532.55212.60332.56112.5862
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004121
(v1.0)
1449446_atMm.339224Ccdc59NM_025602.352713
114.925298.8196.725184.1583.5
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004121
(v1.0)
A_52_P557995D10Ertd718eNM_02560252713
11P0.4190.0728P
Proteome N/A