DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004152
GeneCcdc85c
SynonymsGm9010
Desc.coiled-coil domain containing 85C
LocusNM_001159910 chr12:109444555-109513627(-)
DB links


Entrez 668158
MGI 3644008
Ensembl ENSMUSG00000084883
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004039
(v2.0)
Ccdc85cNM_001159910668158
2.5223721.4325.808721.96218.714832.79441.9227953.011312.95041.809
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004152
(v1.0)
Ccdc85c668158
Maternal RNA0.9407
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004039
(v2.0)
Ccdc85c668158
886/5380.2065441/538-0.4022179/5381.9893498/5381.216261/5381.00861742/5381.0943
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004039
(v2.0)
Ccdc85c668158
464/2040.6701214/204-0.0469165/2043.2203433/2042.4027133/2041.4223744/2041.2633
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004039
(v2.0)
Ccdc85c668158
73.090622332.78
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004039
(v2.0)
Ccdc85c668158
10.42311407.45
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004152
(v1.0)
Ccdc85cNM_001159910668158
22.289518.042116.3396.035341.36015
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004152
(v1.0)
Ccdc85cNM_001159910668158
207.41381.4643146.54742.395312.4745
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004152
(v1.0)
Ccdc85cNM_001159910668158
23.30570.92245619.6843
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004152
(v1.0)
Ccdc85cNM_001159910668158
22.748717.860939.3903
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004152
(v1.0)
Ccdc85cNM_001159910668158
82.1669210.982
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004152
(v1.0)
Ccdc85cNM_001159910668158
23.31930.90982243.202
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004152
(v1.0)
Ccdc85cNM_001159910668158
15.12735.827368.99583
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004152
(v1.0)
Ccdc85cNM_001159910668158
32.096643.4488
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004152
(v1.0)
Ccdc85cNM_001159910668158
0.3548080.0546796
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A