DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004210
GeneCcndbp1
SynonymsDIP1
GCIP
Maid
SSEC-8
stage specific embryonic cDNA-8
Desc.cyclin D-type binding-protein 1
LocusNM_010761 chr2:120834144-120842648(+)
DB links


Entrez 17151
MGI 109595
Ensembl ENSMUSG00000023572
Vega OTTMUSG00000015966
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004096
(v2.0)
Ccndbp1NM_01076117151
28.2592242.311681.132114.4940.110114.011312.7408519.83448.280117.0134
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004210
(v1.0)
Ccndbp117151
Minor ZGA0.98609
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004096
(v2.0)
Ccndbp117151
724/4500.1729392/450-0.314565/4500.7933148/450-0.27147/450-3.769388/450-2.9323
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004096
(v2.0)
Ccndbp117151
332/1860.3215171/186-0.236158/1861.8534127/1860.77273/186-3.513332/186-3.0795
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004096
(v2.0)
Ccndbp117151
72.835712956.46
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004096
(v2.0)
Ccndbp117151
22.04757131.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004210
(v1.0)
Ccndbp1NM_01076117151
251.853471.90285.267127.78739.00701
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004210
(v1.0)
Ccndbp1NM_01076117151
1200.311927.04436.218136.81167.6747
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004210
(v1.0)
Ccndbp1NM_01076117151
263.33510.3347514.856
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004210
(v1.0)
Ccndbp1NM_01076117151
257.042467.164385.205
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004210
(v1.0)
Ccndbp1NM_01076117151
2027.491854.97
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004210
(v1.0)
Ccndbp1NM_01076117151
263.48910.1931422.48
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004210
(v1.0)
Ccndbp1NM_01076117151
78.944126.829733.517
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004210
(v1.0)
Ccndbp1NM_01076117151
156.12202.129
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004210
(v1.0)
Ccndbp1NM_01076117151
257.44291.954
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004210
(v1.0)
Ccndbp1NM_01076117151
783.492730.422
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004210
(v1.0)
8457H3066D08-3Maid17151
U002342NAP010143-001Maid;TC905521,TC847564Q61162U,F,24.21154.35713.82063.49043.48773.38273.4166
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004210
(v1.0)
1420745_a_atMm.7838Ccndbp1NM_010761.217151
2471.852422812.675186.875286.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004210
(v1.0)
A_51_P154469Ccndbp1NM_01076117151
11P1.0540.692P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004210
(v1.0)
Ccndbp117151
010010