DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004248
GeneCct4
SynonymsA45
Cctd
T complex protein 1, delta
TCP-1 delta
Desc.chaperonin containing Tcp1, subunit 4 (delta)
LocusNM_009837 chr11:22890593-22903336(+)
DB links


Entrez 12464
MGI 104689
Ensembl ENSMUSG00000007739
Vega OTTMUSG00000005269
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004136
(v2.0)
Cct4NM_00983712464
71.378622.852212.3503123.047325.352424.462184.0299.17096247.292500.448
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004248
(v1.0)
Cct412464
MGA0.99843
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004136
(v2.0)
Cct412464
659/4090.175459/4090.0501188/4092.4452488/4091.580238/409-1.3474241/409-1.3569
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004136
(v2.0)
Cct412464
353/1970.3272226/1970.0815182/1973.4085472/1972.576612/197-1.89471/197-2.0485
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004136
(v2.0)
Cct412464
63.313212749.85
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004136
(v2.0)
Cct412464
20.38247726.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004248
(v1.0)
Cct4NM_00983712464
23.74588.5815991.6395225.84130.997
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004248
(v1.0)
Cct4NM_00983712464
40.208918.188215.758355.004187.56
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004248
(v1.0)
Cct4NM_00983712464
24.828526.10399.3627
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004248
(v1.0)
Cct4NM_00983712464
24.2358.495426.80367
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004248
(v1.0)
Cct4NM_00983712464
73.2253.5454
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004248
(v1.0)
Cct4NM_00983712464
24.842925.74647.46204
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004248
(v1.0)
Cct4NM_00983712464
84.8439218.058170.543
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004248
(v1.0)
Cct4NM_00983712464
769.715661.776
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004248
(v1.0)
Cct4NM_00983712464
3.6185975.4154
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004248
(v1.0)
Cct4NM_00983712464
9.380056.37145
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004248
(v1.0)
4848G0109E01-3Mm.6821Cct412464
U012373NAP007763-001Cct4;TC897195,TC897189,TC897188,TC897184,TC897183,TC897181,TC897177P80315U,F,23.47673.42274.36725.18755.04355.12114.9392
0004248
(v1.0)
7193H3044B01-3U012373NAP034475-1Cct4;TC844778P80315U,F,22.94192.85392.59132.86073.00382.91843.0052
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004248
(v1.0)
1415867_atMm.296985Cct4NM_009837.112464
363.150576.352376.32534.675
0004248
(v1.0)
1433447_x_atMm.296985Cct4NM_009837.112464
618.225139.15922.9753605.1752973.25
0004248
(v1.0)
1438560_x_atMm.296985Cct4NM_009837.112464
266.67586.7456.41801.41298.975
0004248
(v1.0)
1456572_x_atMm.296985Cct4NM_009837.112464
104.4587.15133.3289.025162.6
0004248
(v1.0)
1456082_x_atMm.296985Cct4NM_009837.112464
00280.425634.925357.75
0004248
(v1.0)
1430034_atMm.296985Cct4NM_009837.112464
120.25118.40217.475417.3
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004248
(v1.0)
Cct412464
16189323613