DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004440
GeneCdk4
SynonymsCrk3
p34/cdk4
Desc.cyclin-dependent kinase 4
LocusNM_009870 chr10:126500659-126504338(+)
DB links


Entrez 12567
MGI 88357
Ensembl ENSMUSG00000006728
Vega OTTMUSG00000030604
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004329
(v2.0)
Cdk4NM_00987012567
69.60856.943675.8420341.040384.0259509.854257.4717.6291889.2946593.449
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004440
(v1.0)
Cdk412567
MGA0.99872
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004329
(v2.0)
Cdk412567
752/4900.1049384/490-0.4668102/4901.3156297/4900.606448/490-1.2763394/490-0.9113
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004329
(v2.0)
Cdk412567
268/221-0.2335138/221-0.790866/2211.8021159/2210.8491/221-4.75766/221-2.3166
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004329
(v2.0)
Cdk412567
76.600119140.1
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004329
(v2.0)
Cdk412567
28.13239031.26
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004440
(v1.0)
Cdk4NM_00987012567
7.219934.0477430.596258.6048184.697
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004440
(v1.0)
Cdk4NM_00987012567
53.674331.2882124.781333.5051247.45
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004440
(v1.0)
Cdk4NM_00987012567
7.549125.45654.41618
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004440
(v1.0)
Cdk4NM_00987012567
7.368674.00715.66225
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004440
(v1.0)
Cdk4NM_00987012567
44.869460.6179
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004440
(v1.0)
Cdk4NM_00987012567
7.5534925.10796.21016
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004440
(v1.0)
Cdk4NM_00987012567
28.327356.585361.7958
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004440
(v1.0)
Cdk4NM_00987012567
213.551238.749
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004440
(v1.0)
Cdk4NM_00987012567
1.1152217.1783
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004440
(v1.0)
Cdk4NM_00987012567
00.0944774
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004440
(v1.0)
2064C0287A08-3Mm.6839Cdk412567
U032322NAP031493-12700085A14Rik;P30285U,F,22.66732.8272.57722.992.81863.03182.9025
0004440
(v1.0)
19296L0265A05-3Mm.6839Cdk412567
U012134NAP107039-1Cdk4;TC830189,TC830187,TC830186P30285U,F,24.27244.45454.99964.98264.7464.77644.6469
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004440
(v1.0)
1422439_a_atMm.6839Cdk4NM_009870.312567
000327.25542.7
0004440
(v1.0)
1422441_x_atMm.6839Cdk4NM_009870.312567
000352.325565.4
Agilent44K N/A
Proteome N/A