DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004662
GeneChmp4b
Synonymschromatin modifying protein 4B
Snf7-2
Desc.charged multivesicular body protein 4B
LocusNM_029362 chr2:154482762-154520519(+)
DB links


Entrez 75608
MGI 1922858
Ensembl ENSMUSG00000038467
Vega OTTMUSG00000015914
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004577
(v2.0)
Chmp4bNM_02936275608
127.2133.6557110.142339.654564.129640.369743.208510.585456.299348.3982
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004662
(v1.0)
Chmp4b75608
MGA0.99006
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004577
(v2.0)
Chmp4b75608
661/497-0.1012421/497-0.3548168/4972.01517/4971.383725/497-2.2109249/497-1.5906
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004577
(v2.0)
Chmp4b75608
307/1740.3048208/1740.1405154/1743.337457/1742.70687/174-2.419350/174-2.3636
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004577
(v2.0)
Chmp4b75608
78.709812662.47
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004577
(v2.0)
Chmp4b75608
28.43167338.95
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004662
(v1.0)
Chmp4bNM_02936275608
3.801247.0585229.507944.542330.7626
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004662
(v1.0)
Chmp4bNM_02936275608
4.932368.6356134.685354.829636.6588
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004662
(v1.0)
Chmp4bNM_02936275608
3.9745446.52297.701
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004662
(v1.0)
Chmp4bNM_02936275608
3.879556.987647.85648
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004662
(v1.0)
Chmp4bNM_02936275608
8.768169.61628
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004662
(v1.0)
Chmp4bNM_02936275608
3.9768545.88578.61672
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004662
(v1.0)
Chmp4bNM_02936275608
27.319743.007338.9752
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004662
(v1.0)
Chmp4bNM_02936275608
54.236647.4387
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004662
(v1.0)
Chmp4bNM_02936275608
2.658737.38281
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004662
(v1.0)
Chmp4bNM_02936275608
0.4475630.346396
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004662
(v1.0)
1426240_atMm.262480Chmp4bNM_029362.375608
84.62598.8160.8263.175280.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004662
(v1.0)
A_52_P288873Chmp4bNM_02936275608
11P0.1870.0394P
0004662
(v1.0)
A_52_P622680Chmp4bNM_02936275608
11P0.2220.067P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004662
(v1.0)
Chmp4b75608
302302