DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004724
GeneCib1
SynonymsKip
Desc.calcium and integrin binding 1 (calmyrin)
LocusNM_011870 chr7:87372046-87377502(-)
DB links


Entrez 23991
MGI 1344418
Ensembl ENSMUSG00000030538
Vega OTTMUSG00000022916
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004641
(v2.0)
Cib1NM_001291275,NM_001291276,NM_01187023991
311.33272.0319134.68734.101638.048367.787425.779674.923836.364270.7563
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004724
(v1.0)
Cib123991
Minor ZGA0.98724
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004641
(v2.0)
Cib123991
740/4900.0818400/490-0.408157/4901.9329510/4901.384418/490-2.6431152/490-2.2767
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004641
(v2.0)
Cib123991
332/1740.4172171/174-0.1404122/1743.0034368/1742.39515/174-2.834352/174-2.3087
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004641
(v2.0)
Cib123991
75.187214252.95
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004641
(v2.0)
Cib123991
22.45278626.11
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004724
(v1.0)
Cib1NM_01187023991
84.4704107.25629.033530.794221.2776
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004724
(v1.0)
Cib1NM_01187023991
227.759248.92963.913573.119254.5948
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004724
(v1.0)
Cib1NM_01187023991
88.3216127.638117.019
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004724
(v1.0)
Cib1NM_01187023991
86.2106106.17971.4585
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004724
(v1.0)
Cib1NM_01187023991
309.033177.676
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004724
(v1.0)
Cib1NM_01187023991
88.3729125.88978.3732
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004724
(v1.0)
Cib1NM_01187023991
26.880529.73330.7464
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004724
(v1.0)
Cib1NM_01187023991
258.149258.856
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004724
(v1.0)
Cib1NM_01187023991
7.430699.98348
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004724
(v1.0)
Cib1NM_01187023991
136.606101.982
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004724
(v1.0)
13819J0208D02-3Mm.30217Cib123991
Cib13.2493.28762.9012.8952.59182.83452.7303
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004724
(v1.0)
1448564_atMm.30217Cib1NM_011870.423991
161.525266.775141.425127.175174.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004724
(v1.0)
A_51_P175454Cib1NM_01187023991
11P1.4720.161P
0004724
(v1.0)
A_52_P123384Cib1NM_01187023991
11P1.0060.96P
Proteome N/A