DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004751
GeneCkap5
Synonyms
Desc.cytoskeleton associated protein 5
LocusNM_001165989 chr2:91386479-91460822(+)
NM_029437 chr2:91386479-91460822(+)
DB links


Entrez 75786
MGI 1923036
Ensembl ENSMUSG00000040549
Vega OTTMUSG00000014251
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004670
(v2.0)
Ckap5NM_001165989,NM_02943775786
7.4264951.072771.020450.923635.244722.028333.27441.052237.353825.5555
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004751
(v1.0)
Ckap575786
Minor ZGA0.93471
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004670
(v2.0)
Ckap575786
482/2970.1852420/2970.38266/297-1.863716/297-2.807713/297-2.369369/297-2.6787
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004670
(v2.0)
Ckap575786
145/910.1577140/910.50063/91-1.08734/91-2.89394/91-2.192619/91-2.7643
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004670
(v2.0)
Ckap575786
34.72543793.85
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004670
(v2.0)
Ckap575786
10.87781290.65
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004751
(v1.0)
Ckap5NM_001165989,NM_02943775786
53.071649.114437.913624.448623.461
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004751
(v1.0)
Ckap5FR115810,FR209190,FR220877,NM_001165989,NM_02943775786
455.851417.84394.034269.221210.419
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004751
(v1.0)
Ckap5NM_001165989,NM_02943775786
55.49122.7161653.5849
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004751
(v1.0)
Ckap5NM_001165989,NM_02943775786
54.164948.621330.4165
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004751
(v1.0)
Ckap5FR115810,FR209190,FR220877,NM_001165989,NM_02943775786
660.549416.24
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004751
(v1.0)
Ckap5NM_001165989,NM_02943775786
55.52352.6789633.3598
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004751
(v1.0)
Ckap5NM_001165989,NM_02943775786
35.102123.606125.9031
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004751
(v1.0)
Ckap5FR115810,FR209190,FR220877,NM_001165989,NM_02943775786
292.736290.963
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004751
(v1.0)
Ckap5NM_001165989,NM_02943775786
22.756917.8452
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004751
(v1.0)
Ckap5NM_001165989,NM_02943775786
23.635228.2971
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004751
(v1.0)
1437349_atMm.168478Ckap5NM_001165989.1,NM_029437.275786
281.95429.375217.075171.525197.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004751
(v1.0)
A_51_P196243Ckap5NM_02943775786
11P0.4230.0779P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004751
(v1.0)
Ckap575786
203611265218