DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004795
GeneCldn25
SynonymsCldnd1
Desc.claudin 25
LocusNM_001252451 chr16:58728023-58734360(+)
NM_171826 chr16:58728023-58734360(+)
NR_045517 chr16:58728023-58734360(+)
NR_045518 chr16:58728023-58734360(+)
NM_001252450 chr16:58728023-58734360(+)
DB links


Entrez 224250
MGI 2447860
Ensembl ENSMUSG00000022744
Vega OTTMUSG00000028494
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004715
(v2.0)
Cldn25NM_001252450,NM_001252451,NM_171826,NR_045517,NR_045518224250
10.466937.63756.53158.1329511.121729.403265.801240.676211.164229.0828
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004795
(v1.0)
Cldnd1224250
Minor ZGA0.97176
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004715
(v2.0)
Cldn25224250
701/4460.1393533/4460.1406180/4462.2613562/4461.6593105/446-0.0286476/446-0.5041
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004715
(v2.0)
Cldn25224250
303/1900.1597244/1900.2435163/1903.2994502/1902.716941/190-0.151190/190-0.5955
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004795
(v1.0)
Cldnd1NM_171826224250
41.232440.40626.428638.2115249.952
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004795
(v1.0)
Cldnd1NM_171826224250
93.680192.983711.098817.13874.8419
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004795
(v1.0)
Cldnd1NM_171826224250
43.11233.8578744.084
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004795
(v1.0)
Cldnd1NM_171826224250
42.081940.000531.6221
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004795
(v1.0)
Cldnd1NM_171826224250
165.423114.677
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004795
(v1.0)
Cldnd1NM_171826224250
43.13743.8050334.6821
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004795
(v1.0)
Cldnd1NM_171826224250
5.951917.928558.18242
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004795
(v1.0)
Cldnd1NM_171826224250
56.15949.9014
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004795
(v1.0)
Cldnd1NM_171826224250
50.41951.23443
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004795
(v1.0)
Cldnd1NM_171826224250
1.340374.02929
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004795
(v1.0)
5581H3003C02-3Mm.29482AW489850224250
U017229NAP121034-001TC919507Q9CQX5U,F2.92043.07923.07612.96222.9162.91762.9595
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004795
(v1.0)
1429555_atMm.29482Cldnd1NM_171826.2224250
43.525034.500
0004795
(v1.0)
1431293_a_atMm.29482Cldnd1NM_171826.2224250
293.1791.375245.350103.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004795
(v1.0)
A_51_P4464771110019C08RikNM_171826224250
11P0.4370.0821P
Proteome N/A