DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004840
GeneClic4
SynonymsD0Jmb3
mc3s5
mtCLIC
Desc.chloride intracellular channel 4 (mitochondrial)
LocusNM_013885 chr4:134769885-134828675(-)
DB links


Entrez 29876
MGI 1352754
Ensembl ENSMUSG00000037242
Vega OTTMUSG00000009685
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004761
(v2.0)
Clic4NM_01388529876
45.227686.544193.019738.913922.55947.662550.293887.948323.724237.672
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004840
(v1.0)
Clic429876
Maternal RNA0.96929
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004761
(v2.0)
Clic429876
832/5020.2157448/502-0.2798204/5022.2745557/5021.476691/502-0.4021535/502-0.5063
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004761
(v2.0)
Clic429876
423/1740.7653215/1740.188185/1743.6467/1742.73832/174-0.3749172/174-0.6116
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004761
(v2.0)
Clic429876
68.199619734.62
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004761
(v2.0)
Clic429876
15.551314111.03
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004840
(v1.0)
Clic4NM_01388529876
89.965764.327728.970415.653835.4588
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004840
(v1.0)
Clic4NM_01388529876
80.141254.728524.380113.001529.9023
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004840
(v1.0)
Clic4NM_01388529876
94.067416.540270.1829
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004840
(v1.0)
Clic4NM_01388529876
91.819163.681865.0994
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004840
(v1.0)
Clic4NM_01388529876
55.577857.626
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004840
(v1.0)
Clic4NM_01388529876
94.12216.313771.3988
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004840
(v1.0)
Clic4NM_01388529876
26.82215.114416.4485
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004840
(v1.0)
Clic4NM_01388529876
12.860914.4045
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004840
(v1.0)
Clic4NM_01388529876
31.04645.68346
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004840
(v1.0)
Clic4NM_01388529876
4.9617510.3804
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004840
(v1.0)
651C0124E06-3Mm.22409Clic429876
U025654NAP096203-001Clic4;TC874044Q9QYB1U,F,23.2393.27713.08053.23963.06653.85564.4645
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004840
(v1.0)
1423392_atMm.257765Clic4NM_013885.229876
427.775337.25313.7197.125796.825
0004840
(v1.0)
1438606_a_atMm.257765Clic4NM_013885.229876
387.290.075200.8296.42067.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004840
(v1.0)
A_51_P127681Clic4NM_01388529876
11P0.4390.0768P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004840
(v1.0)
Clic429876
63.51158.53