DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004845
GeneClip2
SynonymsCLIP-115
Cyln2
WSCR4
Desc.CAP-GLY domain containing linker protein 2
LocusNM_009990 chr5:134965256-135028304(-)
NM_001039162 chr5:134965256-135028304(-)
DB links


Entrez 269713
MGI 1313136
Ensembl ENSMUSG00000063146
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004766
(v2.0)
Clip2NM_001039162,NM_009990269713
4.9971230.095230.572311.661612.42861.2604312.319544.463611.31051.04475
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004845
(v1.0)
Clip2269713
Maternal RNA0.97734
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004766
(v2.0)
Clip2269713
782/4450.2999441/445-0.1289164/4452.1309635/4451.8384255/4451.24671461/4451.114
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004766
(v2.0)
Clip2269713
437/1980.6268220/1980.0356153/1983.1527540/1982.7632143/1981.5683814/1981.4356
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004766
(v2.0)
Clip2269713
52.674914137.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004766
(v2.0)
Clip2269713
14.66337419.82
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004845
(v1.0)
Clip2NM_001039162,NM_009990269713
31.291721.23098.674278.639648.67165
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004845
(v1.0)
Clip2NM_001039162,NM_009990269713
48.697542.362718.419215.924817.1091
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004845
(v1.0)
Clip2NM_001039162,NM_009990269713
32.71831.8286723.1633
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004845
(v1.0)
Clip2NM_001039162,NM_009990269713
31.936321.017733.0326
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004845
(v1.0)
Clip2NM_001039162,NM_009990269713
51.342580.1284
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004845
(v1.0)
Clip2NM_001039162,NM_009990269713
32.73731.8036236.229
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004845
(v1.0)
Clip2NM_001039162,NM_009990269713
8.031038.341917.85055
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004845
(v1.0)
Clip2NM_001039162,NM_009990269713
11.32329.87492
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004845
(v1.0)
Clip2NM_001039162,NM_009990269713
7.660321.60439
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004845
(v1.0)
Clip2NM_001039162,NM_009990269713
0.2010210.12677
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004845
(v1.0)
A_52_P360112Cyln2BC039162269713
11P0.8550.569P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004845
(v1.0)
Clip2269713
001001