DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004888
GeneCmc1
Synonyms
Desc.COX assembly mitochondrial protein 1
LocusNM_026442 chr9:117973645-118059314(-)
DB links


Entrez 67899
MGI 1915149
Ensembl ENSMUSG00000039163
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004811
(v2.0)
Cmc1NM_02644267899
12.004237.331123.651513.21116.341368.5922510.301623.4739.345659.91892
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004888
(v1.0)
Cmc167899
Maternal RNA0.98041
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004811
(v2.0)
Cmc167899
623/4330.012418/433-0.1667136/4331.901345/4330.999350/433-1.0418366/433-0.8392
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004811
(v2.0)
Cmc167899
337/2040.2104199/204-0.1512132/2042.9006333/2042.024916/204-1.5563134/204-1.1965
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004811
(v2.0)
Cmc167899
79.851415950.22
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004811
(v2.0)
Cmc167899
20.5019621.36
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004888
(v1.0)
Cmc1NM_02644267899
38.788716.38399.822094.398057.29143
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004888
(v1.0)
Cmc1NM_02644267899
47.44418.682111.80495.166468.61325
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004888
(v1.0)
Cmc1NM_02644267899
40.55724.3900717.8752
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004888
(v1.0)
Cmc1NM_02644267899
39.587816.219417.4294
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004888
(v1.0)
Cmc1NM_02644267899
18.970919.9856
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004888
(v1.0)
Cmc1NM_02644267899
40.58084.3299519.1159
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004888
(v1.0)
Cmc1NM_02644267899
9.093734.246496.50294
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004888
(v1.0)
Cmc1NM_02644267899
5.11068.16391
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004888
(v1.0)
Cmc1NM_02644267899
14.71359.65059
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004888
(v1.0)
Cmc1NM_02644267899
11.104213.4421
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004888
(v1.0)
532C0115E05-3Mm.99532010110K16Rik67899
U031416NAP095712-0012010110K16Rik;TC848994,TC848991Q9CPZ82.97123.13162.90993.05662.92842.82323.2493
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004888
(v1.0)
1431510_s_atMm.9953Cmc1NM_026442.367899
1061.325228.025165.95129.175497.2
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004888
(v1.0)
A_52_P3838622010110K16RikNM_02644267899
11P0.4630.0886P
Proteome N/A