DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005051
GeneCopb2
Synonyms
Desc.coatomer protein complex, subunit beta 2 (beta prime)
LocusNM_015827 chr9:98464150-98488794(+)
DB links


Entrez 50797
MGI 1354962
Ensembl ENSMUSG00000032458
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004982
(v2.0)
Copb2NM_01582750797
46.947679.87776.259132.474657.627261.0578112.07755.245857.769167.3072
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005051
(v1.0)
Copb250797
Maternal RNA0.90838
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004982
(v2.0)
Copb250797
714/4700.0903475/470-0.1007267/4702.7539646/4701.784777/470-0.5461524/470-0.4413
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004982
(v2.0)
Copb250797
345/2110.1957213/211-0.1021257/2113.8105607/2112.84115/211-1.6915115/211-1.4629
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004982
(v2.0)
Copb250797
56.800512146.94
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004982
(v2.0)
Copb250797
22.61888526.61
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005051
(v1.0)
Copb2NM_01582750797
83.002152.850624.196139.945178.5613
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005051
(v1.0)
Copb2NM_01582750797
222.38889.599653.2228117.882300.618
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005051
(v1.0)
Copb2NM_01582750797
86.786317.169257.6611
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005051
(v1.0)
Copb2NM_01582750797
84.71252.319940.9404
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005051
(v1.0)
Copb2NM_01582750797
259.501286.864
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005051
(v1.0)
Copb2NM_01582750797
86.836716.934144.902
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005051
(v1.0)
Copb2NM_01582750797
22.401838.568639.8019
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005051
(v1.0)
Copb2NM_01582750797
202.187215.504
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005051
(v1.0)
Copb2NM_01582750797
108.81616.3553
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005051
(v1.0)
Copb2NM_01582750797
2.94875.3631
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005051
(v1.0)
4961G0116F05-3Mm.18729Copb250797
U010896NAP009722-001Copb2TC885904,TC885900,TC885899,TC885894,TC885893O55029U,F,22.58152.90312.95923.23762.63762.97912.7786
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005051
(v1.0)
1452102_atMm.400464Copb2NM_015827.250797
742.35471.325256251.8436.875
0005051
(v1.0)
1456175_a_atMm.400464Copb2NM_015827.250797
250.8537.5552.4563.3134.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005051
(v1.0)
A_51_P243857Copb2NM_01582750797
11P0.8030.3P
0005051
(v1.0)
A_52_P110650Copb2AK03325050797
11P1.0110.948P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005051
(v1.0)
Copb250797
12146152613