DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005063
GeneCopz1
SynonymsD4Ertd360e
nonclathrin coat protein zeta1-COP
Desc.coatomer protein complex, subunit zeta 1
LocusNM_019817 chr15:103103349-103130295(+)
DB links


Entrez 56447
MGI 1929063
Ensembl ENSMUSG00000060992
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004995
(v2.0)
Copz1NM_01981756447
76.6425129.722282.71835.516250.6159164.682108.167310.61245.7678186.06
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005063
(v1.0)
Copz156447
Minor ZGA0.98592
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004995
(v2.0)
Copz156447
483/380-0.1663343/380-0.263293/3801.5405182/3800.267671/380-0.3579558/380-0.045
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004995
(v2.0)
Copz156447
239/181-0.1112157/181-0.319489/1812.4995162/1811.160225/181-0.7744143/181-0.9321
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004995
(v2.0)
Copz156447
43.00069147.25
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004995
(v2.0)
Copz156447
12.41655522.58
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005063
(v1.0)
Copz1NM_01981756447
134.852195.70826.436735.142276.4437
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005063
(v1.0)
Copz1NM_01981756447
535.013948.4549.9358174.815286.866
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005063
(v1.0)
Copz1NM_01981756447
141.00128.0289213.522
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005063
(v1.0)
Copz1NM_01981756447
137.631193.743230.391
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005063
(v1.0)
Copz1NM_01981756447
388.758382.121
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005063
(v1.0)
Copz1NM_01981756447
141.08327.645252.685
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005063
(v1.0)
Copz1NM_01981756447
24.476333.931231.6675
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005063
(v1.0)
Copz1NM_01981756447
45.226351.5762
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005063
(v1.0)
Copz1NM_01981756447
145.75132.3346
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005063
(v1.0)
Copz1NM_01981756447
7.664835.8029
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005063
(v1.0)
5009G0119B06-3Mm.29473Copz156447
U016739NAP005349-001Copz1;TC874290,TC874287,TC838132U,F,22.97563.23543.10133.13752.88963.10772.992
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005063
(v1.0)
1451825_a_atMm.29473Copz1NM_019817.156447
613.125392.4435.5223.95381.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005063
(v1.0)
A_51_P515482Copz1NM_01981756447
11P1.0520.704P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005063
(v1.0)
Copz156447
2624214