DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005282
GeneCsnk2a1
SynonymsCsnk2a1-rs4
Desc.casein kinase 2, alpha 1 polypeptide
LocusNM_007788 chr2:152052576-152107587(+)
DB links


Entrez 12995
MGI 88543
Ensembl ENSMUSG00000074698
Vega OTTMUSG00000015858
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005218
(v2.0)
Csnk2a1NM_00778812995
19.84161.8424130.52594.9325119.40777.501338.9643109.75118.43685.7344
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005282
(v1.0)
Csnk2a112995
Minor ZGA0.9949
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005218
(v2.0)
Csnk2a112995
624/3840.1872423/3840.0233128/3841.9824210/3840.45827/384-1.7354255/384-1.1852
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005218
(v2.0)
Csnk2a112995
306/1620.4026166/162-0.0805118/1623.0518196/1621.59124/162-2.996777/162-1.6532
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005218
(v2.0)
Csnk2a112995
29.576711825.06
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005218
(v2.0)
Csnk2a112995
6.5647897.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005282
(v1.0)
Csnk2a1NM_00778812995
64.276990.158570.678682.792727.6355
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005282
(v1.0)
Csnk2a1FR066924,FR195641,FR329965,NM_00778812995
74.718599.382959.838761.314632.5226
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005282
(v1.0)
Csnk2a1NM_00778812995
67.20747.2560598.3648
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005282
(v1.0)
Csnk2a1NM_00778812995
65.601189.253281.2089
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005282
(v1.0)
Csnk2a1FR066924,FR195641,FR329965,NM_00778812995
100.93477.8964
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005282
(v1.0)
Csnk2a1NM_00778812995
67.24657.1566789.0671
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005282
(v1.0)
Csnk2a1NM_00778812995
65.437479.939781.9335
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005282
(v1.0)
Csnk2a1FR066924,FR195641,FR329965,NM_00778812995
60.65248.8798
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005282
(v1.0)
Csnk2a1NM_00778812995
78.124518.7692
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005282
(v1.0)
Csnk2a1NM_00778812995
13.762736.8019
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005282
(v1.0)
1419034_atMm.23692Csnk2a1NM_007788.312995
92.3134.3365.8154.22584.8
0005282
(v1.0)
1419035_s_atMm.23692Csnk2a1NM_007788.312995
53.691.675182.6596.259.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005282
(v1.0)
A_52_P513959Csnk2a1NM_00778812995
11P0.5450.104P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005282
(v1.0)
Csnk2a112995
1.5731.5103