DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005456
GeneCyfip1
Synonymsl(7)1Rl
l7Rl1
P140SRA-1
pl-1
Shyc
Sra-1
Desc.cytoplasmic FMR1 interacting protein 1
LocusNM_001164662 chr7:63097441-63188003(+)
NM_001164661 chr7:63097441-63188003(+)
NM_011370 chr7:63097441-63188003(+)
DB links


Entrez 20430
MGI 1338801
Ensembl ENSMUSG00000030447
Vega OTTMUSG00000037588
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Regulation of actin cytoskeleton (mmu04810)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005394
(v2.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
29.5959.6588611.0294.707435.9324311.689419.52468.734767.1853311.0783
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005456
(v1.0)
Cyfip120430
Minor ZGA0.9454
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005394
(v2.0)
Cyfip120430
715/4320.2136559/4320.2551124/4321.772388/4321.1716272/4321.38181402/4321.0973
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005394
(v2.0)
Cyfip120430
382/1660.6863299/1660.7293115/1662.9822365/1662.4502217/1662.4152933/1661.885
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005394
(v2.0)
Cyfip120430
64.851915043.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005394
(v2.0)
Cyfip120430
13.24959513.95
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005456
(v1.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
10.03937.627733.504164.1020213.7185
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005456
(v1.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
199.852168.30187.531473.7419297.323
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005456
(v1.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
10.49710.82328.32202
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005456
(v1.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
10.24617.551146.47598
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005456
(v1.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
277.71223.958
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005456
(v1.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
10.503110.67497.10263
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005456
(v1.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
3.244313.960664.98022
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005456
(v1.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
116.997132.219
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005456
(v1.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
4.813184.89933
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005456
(v1.0)
Cyfip1NM_001164661,NM_001164662,NM_01137020430
3.427265.42081
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005456
(v1.0)
4413C0933B12-3Mm.12912Shyc20430
U008152NAP121463-001Shyc;TC869376Q921M1U,F,23.72643.65453.86213.5883.5293.72073.6608
0005456
(v1.0)
6590H3029A02-3Mm.12912Shyc20430
U008152NAP121463-001Shyc;TC869376Q921M1U,F,23.4043.37443.40163.52433.35093.55743.6076
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005456
(v1.0)
1416329_atMm.37249Cyfip1NM_001164661.1,NM_011370.3,NM_001164662.120430
368.7449.475299.4188.075457.15
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005456
(v1.0)
A_51_P403005Cyfip1NM_01137020430
11P0.7880.254P
0005456
(v1.0)
A_51_P403006Cyfip1NM_01137020430
11P0.7010.174P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005456
(v1.0)
Cyfip120430
440540