DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0005837

Gene

Ddx27

Synonyms

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 27

Locus

NM_153065 UCSC: chr2:166840813-166860445(+) OLP: chr2:166840813-166860445(+)

DB links

Entrez 228889
MGI 2385884
Ensembl ENSMUSG00000017999
Vega OTTMUSG00000001151

Feature

protein-coding

GO_BP

GO_MF

6 Terms

GO_CC

1 Terms

KEGG

see DBTMEE:2005762 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0005837 (v1.0)	Ddx27	NM_153065	228889	12.755	3.57513	33.5333	36.6432	10.6733

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0005837 (v1.0)	Ddx27	NM_153065	228889	13.3366	5.99932	3.90055

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0005837 (v1.0)	Ddx27	NM_153065	228889	13.0178	3.53923	4.42025

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0005837 (v1.0)	Ddx27	NM_153065	228889	13.3443	5.91715	4.84798

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0005837 (v1.0)	Ddx27	NM_153065	228889	31.0466	35.3805	32.4396

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0005837 (v1.0)	Ddx27	NM_153065	228889	7.89165	40.3153

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0005837 (v1.0)	Ddx27	NM_153065	228889	0.920118	2.62246

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0005837 (v1.0)	12910	H3154H10-3	Mm.219575	Ddx27	228889	U002845	NAP098499-001		TC914342	Q921N6	U,F,2	2.9999	2.9803	3.312	3.7667	3.0928	3.6355	3.2892
0005837 (v1.0)	18187	L0067G02-3	Mm.219575	Ddx27	228889	U002845	NAP098499-001		TC914344,TC914342	Q921N6	U,F,2	3.0522	3.1315	3.3039	3.4826	3.2832	3.4796	3.2987

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0005837 (v1.0)	1424161_at	Mm.295031	Ddx27	NM_153065.3	228889	46.1	0	159	187.75	145.8
0005837 (v1.0)	1425541_at	Mm.295031	Ddx27	NM_153065.3	228889	31.875	33.825	105.325	117.325	42.05

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0005837 (v1.0)	A_51_P138772	Ddx27	BC011321	228889	1	1	P	0.672	0.32	P
0005837 (v1.0)	A_52_P240671	Ddx27	NM_153065	228889	1	1	P	1.111	0.574	P

N/A